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Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance
One of the main objectives in pharmacovigilance is the detection of adverse drug events (ADEs) through mining of healthcare databases, such as electronic health records or administrative claims data. Although different approaches have been shown to be of great value, research is still focusing on th...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211266/ https://www.ncbi.nlm.nih.gov/pubmed/25250527 http://dx.doi.org/10.1038/psp.2014.35 |
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author | Vilar, S Ryan, P B Madigan, D Stang, P E Schuemie, M J Friedman, C Tatonetti, N P Hripcsak, G |
author_facet | Vilar, S Ryan, P B Madigan, D Stang, P E Schuemie, M J Friedman, C Tatonetti, N P Hripcsak, G |
author_sort | Vilar, S |
collection | PubMed |
description | One of the main objectives in pharmacovigilance is the detection of adverse drug events (ADEs) through mining of healthcare databases, such as electronic health records or administrative claims data. Although different approaches have been shown to be of great value, research is still focusing on the enhancement of signal detection to gain efficiency in further assessment and follow-up. We applied similarity-based modeling techniques, using 2D and 3D molecular structure, ADE, target, and ATC (anatomical therapeutic chemical) similarity measures, to the candidate associations selected previously in a medication-wide association study for four ADE outcomes. Our results showed an improvement in the precision when we ranked the subset of ADE candidates using similarity scorings. This method is simple, useful to strengthen or prioritize signals generated from healthcare databases, and facilitates ADE detection through the identification of the most similar drugs for which ADE information is available. |
format | Online Article Text |
id | pubmed-4211266 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-42112662014-10-30 Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance Vilar, S Ryan, P B Madigan, D Stang, P E Schuemie, M J Friedman, C Tatonetti, N P Hripcsak, G CPT Pharmacometrics Syst Pharmacol Original Article One of the main objectives in pharmacovigilance is the detection of adverse drug events (ADEs) through mining of healthcare databases, such as electronic health records or administrative claims data. Although different approaches have been shown to be of great value, research is still focusing on the enhancement of signal detection to gain efficiency in further assessment and follow-up. We applied similarity-based modeling techniques, using 2D and 3D molecular structure, ADE, target, and ATC (anatomical therapeutic chemical) similarity measures, to the candidate associations selected previously in a medication-wide association study for four ADE outcomes. Our results showed an improvement in the precision when we ranked the subset of ADE candidates using similarity scorings. This method is simple, useful to strengthen or prioritize signals generated from healthcare databases, and facilitates ADE detection through the identification of the most similar drugs for which ADE information is available. Nature Publishing Group 2014-09 2014-09-24 /pmc/articles/PMC4211266/ /pubmed/25250527 http://dx.doi.org/10.1038/psp.2014.35 Text en Copyright © 2014 American Society for Clinical Pharmacology and Therapeutics http://creativecommons.org/licenses/by/3.0/ This work is licensed under a Creative Commons Attribution 3.0 Unported License The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Original Article Vilar, S Ryan, P B Madigan, D Stang, P E Schuemie, M J Friedman, C Tatonetti, N P Hripcsak, G Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance |
title | Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance |
title_full | Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance |
title_fullStr | Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance |
title_full_unstemmed | Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance |
title_short | Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance |
title_sort | similarity-based modeling applied to signal detection in pharmacovigilance |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211266/ https://www.ncbi.nlm.nih.gov/pubmed/25250527 http://dx.doi.org/10.1038/psp.2014.35 |
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