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Genomic Heritability of Bovine Growth Using a Mixed Model
This study investigated heritability for bovine growth estimated with genomewide single nucleotide polymorphism (SNP) information obtained from a DNA microarray chip. Three hundred sixty seven Korean cattle were genotyped with the Illumina BovineSNP50 BeadChip, and 39,112 SNPs of 364 animals filtere...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST)
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4213694/ https://www.ncbi.nlm.nih.gov/pubmed/25358309 http://dx.doi.org/10.5713/ajas.2014.14287 |
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author | Ryu, Jihye Lee, Chaeyoung |
author_facet | Ryu, Jihye Lee, Chaeyoung |
author_sort | Ryu, Jihye |
collection | PubMed |
description | This study investigated heritability for bovine growth estimated with genomewide single nucleotide polymorphism (SNP) information obtained from a DNA microarray chip. Three hundred sixty seven Korean cattle were genotyped with the Illumina BovineSNP50 BeadChip, and 39,112 SNPs of 364 animals filtered by quality assurance were analyzed to estimate heritability of body weights at 6, 9, 12, 15, 18, 21, and 24 months of age. Restricted maximum likelihood estimate of heritability was obtained using covariance structure of genomic relationships among animals in a mixed model framework. Heritability estimates ranged from 0.58 to 0.76 for body weights at different ages. The heritability estimates using genomic information in this study were larger than those which had been estimated previously using pedigree information. The results revealed a trend that the heritability for body weight increased at a younger age (6 months). This suggests an early genetic evaluation for bovine growth using genomic information to increase genetic merits of animals. |
format | Online Article Text |
id | pubmed-4213694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) |
record_format | MEDLINE/PubMed |
spelling | pubmed-42136942014-11-03 Genomic Heritability of Bovine Growth Using a Mixed Model Ryu, Jihye Lee, Chaeyoung Asian-Australas J Anim Sci Article This study investigated heritability for bovine growth estimated with genomewide single nucleotide polymorphism (SNP) information obtained from a DNA microarray chip. Three hundred sixty seven Korean cattle were genotyped with the Illumina BovineSNP50 BeadChip, and 39,112 SNPs of 364 animals filtered by quality assurance were analyzed to estimate heritability of body weights at 6, 9, 12, 15, 18, 21, and 24 months of age. Restricted maximum likelihood estimate of heritability was obtained using covariance structure of genomic relationships among animals in a mixed model framework. Heritability estimates ranged from 0.58 to 0.76 for body weights at different ages. The heritability estimates using genomic information in this study were larger than those which had been estimated previously using pedigree information. The results revealed a trend that the heritability for body weight increased at a younger age (6 months). This suggests an early genetic evaluation for bovine growth using genomic information to increase genetic merits of animals. Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) 2014-11 /pmc/articles/PMC4213694/ /pubmed/25358309 http://dx.doi.org/10.5713/ajas.2014.14287 Text en Copyright © 2014 by Asian-Australasian Journal of Animal Sciences This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License http://creativecommons.org/licenses/by-nc/3.0/ which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Ryu, Jihye Lee, Chaeyoung Genomic Heritability of Bovine Growth Using a Mixed Model |
title | Genomic Heritability of Bovine Growth Using a Mixed Model |
title_full | Genomic Heritability of Bovine Growth Using a Mixed Model |
title_fullStr | Genomic Heritability of Bovine Growth Using a Mixed Model |
title_full_unstemmed | Genomic Heritability of Bovine Growth Using a Mixed Model |
title_short | Genomic Heritability of Bovine Growth Using a Mixed Model |
title_sort | genomic heritability of bovine growth using a mixed model |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4213694/ https://www.ncbi.nlm.nih.gov/pubmed/25358309 http://dx.doi.org/10.5713/ajas.2014.14287 |
work_keys_str_mv | AT ryujihye genomicheritabilityofbovinegrowthusingamixedmodel AT leechaeyoung genomicheritabilityofbovinegrowthusingamixedmodel |