Comprehensive Analysis of DNA Methylation Data with RnBeads

RnBeads is a software tool for large-scale analysis and interpretation of DNA methylation data, providing a user-friendly analysis workflow that yields detailed hypertext reports (http://rnbeads.mpi-inf.mpg.de). Supported assays include whole genome bisulfite sequencing, reduced representation bisul...

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Autores principales: Assenov, Yassen, Müller, Fabian, Lutsik, Pavlo, Walter, Jörn, Lengauer, Thomas, Bock, Christoph
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2014
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4216143/
https://www.ncbi.nlm.nih.gov/pubmed/25262207
http://dx.doi.org/10.1038/nmeth.3115
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author Assenov, Yassen
Müller, Fabian
Lutsik, Pavlo
Walter, Jörn
Lengauer, Thomas
Bock, Christoph
author_facet Assenov, Yassen
Müller, Fabian
Lutsik, Pavlo
Walter, Jörn
Lengauer, Thomas
Bock, Christoph
author_sort Assenov, Yassen
collection PubMed
description RnBeads is a software tool for large-scale analysis and interpretation of DNA methylation data, providing a user-friendly analysis workflow that yields detailed hypertext reports (http://rnbeads.mpi-inf.mpg.de). Supported assays include whole genome bisulfite sequencing, reduced representation bisulfite sequencing, Infinium microarrays, and any other protocol that produces high-resolution DNA methylation data. Important applications of RnBeads include the analysis of epigenome-wide association studies and epigenetic biomarker discovery in cancer cohorts.
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spelling pubmed-42161432015-05-01 Comprehensive Analysis of DNA Methylation Data with RnBeads Assenov, Yassen Müller, Fabian Lutsik, Pavlo Walter, Jörn Lengauer, Thomas Bock, Christoph Nat Methods Article RnBeads is a software tool for large-scale analysis and interpretation of DNA methylation data, providing a user-friendly analysis workflow that yields detailed hypertext reports (http://rnbeads.mpi-inf.mpg.de). Supported assays include whole genome bisulfite sequencing, reduced representation bisulfite sequencing, Infinium microarrays, and any other protocol that produces high-resolution DNA methylation data. Important applications of RnBeads include the analysis of epigenome-wide association studies and epigenetic biomarker discovery in cancer cohorts. 2014-09-28 2014-11 /pmc/articles/PMC4216143/ /pubmed/25262207 http://dx.doi.org/10.1038/nmeth.3115 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Assenov, Yassen
Müller, Fabian
Lutsik, Pavlo
Walter, Jörn
Lengauer, Thomas
Bock, Christoph
Comprehensive Analysis of DNA Methylation Data with RnBeads
title Comprehensive Analysis of DNA Methylation Data with RnBeads
title_full Comprehensive Analysis of DNA Methylation Data with RnBeads
title_fullStr Comprehensive Analysis of DNA Methylation Data with RnBeads
title_full_unstemmed Comprehensive Analysis of DNA Methylation Data with RnBeads
title_short Comprehensive Analysis of DNA Methylation Data with RnBeads
title_sort comprehensive analysis of dna methylation data with rnbeads
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4216143/
https://www.ncbi.nlm.nih.gov/pubmed/25262207
http://dx.doi.org/10.1038/nmeth.3115
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