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Correspondence of biological condition models of California streams at statewide and regional scales
We used boosted regression trees (BRT) to model stream biological condition as measured by benthic macroinvertebrate taxonomic completeness, the ratio of observed to expected (O/E) taxa. Models were developed with and without exclusion of rare taxa at a site. BRT models are robust, requiring few ass...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4226928/ https://www.ncbi.nlm.nih.gov/pubmed/25384371 http://dx.doi.org/10.1007/s10661-014-4086-x |
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author | May, Jason T. Brown, Larry R. Rehn, Andrew C. Waite, Ian R. Ode, Peter R. Mazor, Raphael D. Schiff, Kenneth C. |
author_facet | May, Jason T. Brown, Larry R. Rehn, Andrew C. Waite, Ian R. Ode, Peter R. Mazor, Raphael D. Schiff, Kenneth C. |
author_sort | May, Jason T. |
collection | PubMed |
description | We used boosted regression trees (BRT) to model stream biological condition as measured by benthic macroinvertebrate taxonomic completeness, the ratio of observed to expected (O/E) taxa. Models were developed with and without exclusion of rare taxa at a site. BRT models are robust, requiring few assumptions compared with traditional modeling techniques such as multiple linear regression. The BRT models were constructed to provide baseline support to stressor delineation by identifying natural physiographic and human land use gradients affecting stream biological condition statewide and for eight ecological regions within the state, as part of the development of numerical biological objectives for California’s wadeable streams. Regions were defined on the basis of ecological, hydrologic, and jurisdictional factors and roughly corresponded with ecoregions. Physiographic and land use variables were derived from geographic information system coverages. The model for the entire state (n = 1,386) identified a composite measure of anthropogenic disturbance (the sum of urban, agricultural, and unmanaged roadside vegetation land cover) within the local watershed as the most important variable, explaining 56 % of the variance in O/E values. Models for individual regions explained between 51 and 84 % of the variance in O/E values. Measures of human disturbance were important in the three coastal regions. In the South Coast and Coastal Chaparral, local watershed measures of urbanization were the most important variables related to biological condition, while in the North Coast the composite measure of human disturbance at the watershed scale was most important. In the two mountain regions, natural gradients were most important, including slope, precipitation, and temperature. The remaining three regions had relatively small sample sizes (n ≤ 75 sites) and had models that gave mixed results. Understanding the spatial scale at which land use and land cover affect taxonomic completeness is imperative for sound management. Our results suggest that invertebrate taxonomic completeness is affected by human disturbance at the statewide and regional levels, with some differences among regions in the importance of natural gradients and types of human disturbance. The construction and application of models similar to the ones presented here could be useful in the planning and prioritization of actions for protection and conservation of biodiversity in California streams. |
format | Online Article Text |
id | pubmed-4226928 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-42269282014-11-13 Correspondence of biological condition models of California streams at statewide and regional scales May, Jason T. Brown, Larry R. Rehn, Andrew C. Waite, Ian R. Ode, Peter R. Mazor, Raphael D. Schiff, Kenneth C. Environ Monit Assess Article We used boosted regression trees (BRT) to model stream biological condition as measured by benthic macroinvertebrate taxonomic completeness, the ratio of observed to expected (O/E) taxa. Models were developed with and without exclusion of rare taxa at a site. BRT models are robust, requiring few assumptions compared with traditional modeling techniques such as multiple linear regression. The BRT models were constructed to provide baseline support to stressor delineation by identifying natural physiographic and human land use gradients affecting stream biological condition statewide and for eight ecological regions within the state, as part of the development of numerical biological objectives for California’s wadeable streams. Regions were defined on the basis of ecological, hydrologic, and jurisdictional factors and roughly corresponded with ecoregions. Physiographic and land use variables were derived from geographic information system coverages. The model for the entire state (n = 1,386) identified a composite measure of anthropogenic disturbance (the sum of urban, agricultural, and unmanaged roadside vegetation land cover) within the local watershed as the most important variable, explaining 56 % of the variance in O/E values. Models for individual regions explained between 51 and 84 % of the variance in O/E values. Measures of human disturbance were important in the three coastal regions. In the South Coast and Coastal Chaparral, local watershed measures of urbanization were the most important variables related to biological condition, while in the North Coast the composite measure of human disturbance at the watershed scale was most important. In the two mountain regions, natural gradients were most important, including slope, precipitation, and temperature. The remaining three regions had relatively small sample sizes (n ≤ 75 sites) and had models that gave mixed results. Understanding the spatial scale at which land use and land cover affect taxonomic completeness is imperative for sound management. Our results suggest that invertebrate taxonomic completeness is affected by human disturbance at the statewide and regional levels, with some differences among regions in the importance of natural gradients and types of human disturbance. The construction and application of models similar to the ones presented here could be useful in the planning and prioritization of actions for protection and conservation of biodiversity in California streams. Springer International Publishing 2014-11-11 2015 /pmc/articles/PMC4226928/ /pubmed/25384371 http://dx.doi.org/10.1007/s10661-014-4086-x Text en © The Author(s) 2014 https://creativecommons.org/licenses/by/4.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Article May, Jason T. Brown, Larry R. Rehn, Andrew C. Waite, Ian R. Ode, Peter R. Mazor, Raphael D. Schiff, Kenneth C. Correspondence of biological condition models of California streams at statewide and regional scales |
title | Correspondence of biological condition models of California streams at statewide and regional scales |
title_full | Correspondence of biological condition models of California streams at statewide and regional scales |
title_fullStr | Correspondence of biological condition models of California streams at statewide and regional scales |
title_full_unstemmed | Correspondence of biological condition models of California streams at statewide and regional scales |
title_short | Correspondence of biological condition models of California streams at statewide and regional scales |
title_sort | correspondence of biological condition models of california streams at statewide and regional scales |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4226928/ https://www.ncbi.nlm.nih.gov/pubmed/25384371 http://dx.doi.org/10.1007/s10661-014-4086-x |
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