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Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan
Environmental metabolomics or ionomics is widely used to characterize the effects of environmental stressors on the health of aquatic organisms. However, most studies have focused on liver and muscle tissues of fish, and little is known about how the other organs are affected by environmental pertur...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4228347/ https://www.ncbi.nlm.nih.gov/pubmed/25387575 http://dx.doi.org/10.1038/srep07005 |
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author | Yoshida, Seiji Date, Yasuhiro Akama, Makiko Kikuchi, Jun |
author_facet | Yoshida, Seiji Date, Yasuhiro Akama, Makiko Kikuchi, Jun |
author_sort | Yoshida, Seiji |
collection | PubMed |
description | Environmental metabolomics or ionomics is widely used to characterize the effects of environmental stressors on the health of aquatic organisms. However, most studies have focused on liver and muscle tissues of fish, and little is known about how the other organs are affected by environmental perturbations and effects such as metal pollutants or eutrophication. We examined the metabolic and mineral profiles of three kinds of abundant fishes in estuarine ecosystem, yellowfin goby, urohaze-goby, and juvenile Japanese seabass sampled from Tsurumi River estuary, Japan. Multivariate analyses, including nuclear magnetic resonance-based metabolomics and inductively coupled plasma optical emission spectrometry-based ionomics approaches, revealed that the profiles were clustered according to differences among body tissues rather than differences in body size, sex, and species. The metabolic and mineral profiles of the muscle and fin tissues, respectively, suggest that these tissues are most appropriate for evaluating environmental perturbations. Such analyses will be highly useful in evaluating the environmental variation and diversity in aquatic ecosystems. |
format | Online Article Text |
id | pubmed-4228347 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-42283472014-11-17 Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan Yoshida, Seiji Date, Yasuhiro Akama, Makiko Kikuchi, Jun Sci Rep Article Environmental metabolomics or ionomics is widely used to characterize the effects of environmental stressors on the health of aquatic organisms. However, most studies have focused on liver and muscle tissues of fish, and little is known about how the other organs are affected by environmental perturbations and effects such as metal pollutants or eutrophication. We examined the metabolic and mineral profiles of three kinds of abundant fishes in estuarine ecosystem, yellowfin goby, urohaze-goby, and juvenile Japanese seabass sampled from Tsurumi River estuary, Japan. Multivariate analyses, including nuclear magnetic resonance-based metabolomics and inductively coupled plasma optical emission spectrometry-based ionomics approaches, revealed that the profiles were clustered according to differences among body tissues rather than differences in body size, sex, and species. The metabolic and mineral profiles of the muscle and fin tissues, respectively, suggest that these tissues are most appropriate for evaluating environmental perturbations. Such analyses will be highly useful in evaluating the environmental variation and diversity in aquatic ecosystems. Nature Publishing Group 2014-11-12 /pmc/articles/PMC4228347/ /pubmed/25387575 http://dx.doi.org/10.1038/srep07005 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Yoshida, Seiji Date, Yasuhiro Akama, Makiko Kikuchi, Jun Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan |
title | Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan |
title_full | Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan |
title_fullStr | Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan |
title_full_unstemmed | Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan |
title_short | Comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of Japan |
title_sort | comparative metabolomic and ionomic approach for abundant fishes in estuarine environments of japan |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4228347/ https://www.ncbi.nlm.nih.gov/pubmed/25387575 http://dx.doi.org/10.1038/srep07005 |
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