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Whole-Genome Sequencing of the World’s Oldest People

Supercentenarians (110 years or older) are the world’s oldest people. Seventy four are alive worldwide, with twenty two in the United States. We performed whole-genome sequencing on 17 supercentenarians to explore the genetic basis underlying extreme human longevity. We found no significant evidence...

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Autores principales: Gierman, Hinco J., Fortney, Kristen, Roach, Jared C., Coles, Natalie S., Li, Hong, Glusman, Gustavo, Markov, Glenn J., Smith, Justin D., Hood, Leroy, Coles, L. Stephen, Kim, Stuart K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4229186/
https://www.ncbi.nlm.nih.gov/pubmed/25390934
http://dx.doi.org/10.1371/journal.pone.0112430
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author Gierman, Hinco J.
Fortney, Kristen
Roach, Jared C.
Coles, Natalie S.
Li, Hong
Glusman, Gustavo
Markov, Glenn J.
Smith, Justin D.
Hood, Leroy
Coles, L. Stephen
Kim, Stuart K.
author_facet Gierman, Hinco J.
Fortney, Kristen
Roach, Jared C.
Coles, Natalie S.
Li, Hong
Glusman, Gustavo
Markov, Glenn J.
Smith, Justin D.
Hood, Leroy
Coles, L. Stephen
Kim, Stuart K.
author_sort Gierman, Hinco J.
collection PubMed
description Supercentenarians (110 years or older) are the world’s oldest people. Seventy four are alive worldwide, with twenty two in the United States. We performed whole-genome sequencing on 17 supercentenarians to explore the genetic basis underlying extreme human longevity. We found no significant evidence of enrichment for a single rare protein-altering variant or for a gene harboring different rare protein altering variants in supercentenarian compared to control genomes. We followed up on the gene most enriched for rare protein-altering variants in our cohort of supercentenarians, TSHZ3, by sequencing it in a second cohort of 99 long-lived individuals but did not find a significant enrichment. The genome of one supercentenarian had a pathogenic mutation in DSC2, known to predispose to arrhythmogenic right ventricular cardiomyopathy, which is recommended to be reported to this individual as an incidental finding according to a recent position statement by the American College of Medical Genetics and Genomics. Even with this pathogenic mutation, the proband lived to over 110 years. The entire list of rare protein-altering variants and DNA sequence of all 17 supercentenarian genomes is available as a resource to assist the discovery of the genetic basis of extreme longevity in future studies.
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spelling pubmed-42291862014-11-18 Whole-Genome Sequencing of the World’s Oldest People Gierman, Hinco J. Fortney, Kristen Roach, Jared C. Coles, Natalie S. Li, Hong Glusman, Gustavo Markov, Glenn J. Smith, Justin D. Hood, Leroy Coles, L. Stephen Kim, Stuart K. PLoS One Research Article Supercentenarians (110 years or older) are the world’s oldest people. Seventy four are alive worldwide, with twenty two in the United States. We performed whole-genome sequencing on 17 supercentenarians to explore the genetic basis underlying extreme human longevity. We found no significant evidence of enrichment for a single rare protein-altering variant or for a gene harboring different rare protein altering variants in supercentenarian compared to control genomes. We followed up on the gene most enriched for rare protein-altering variants in our cohort of supercentenarians, TSHZ3, by sequencing it in a second cohort of 99 long-lived individuals but did not find a significant enrichment. The genome of one supercentenarian had a pathogenic mutation in DSC2, known to predispose to arrhythmogenic right ventricular cardiomyopathy, which is recommended to be reported to this individual as an incidental finding according to a recent position statement by the American College of Medical Genetics and Genomics. Even with this pathogenic mutation, the proband lived to over 110 years. The entire list of rare protein-altering variants and DNA sequence of all 17 supercentenarian genomes is available as a resource to assist the discovery of the genetic basis of extreme longevity in future studies. Public Library of Science 2014-11-12 /pmc/articles/PMC4229186/ /pubmed/25390934 http://dx.doi.org/10.1371/journal.pone.0112430 Text en © 2014 Gierman et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Gierman, Hinco J.
Fortney, Kristen
Roach, Jared C.
Coles, Natalie S.
Li, Hong
Glusman, Gustavo
Markov, Glenn J.
Smith, Justin D.
Hood, Leroy
Coles, L. Stephen
Kim, Stuart K.
Whole-Genome Sequencing of the World’s Oldest People
title Whole-Genome Sequencing of the World’s Oldest People
title_full Whole-Genome Sequencing of the World’s Oldest People
title_fullStr Whole-Genome Sequencing of the World’s Oldest People
title_full_unstemmed Whole-Genome Sequencing of the World’s Oldest People
title_short Whole-Genome Sequencing of the World’s Oldest People
title_sort whole-genome sequencing of the world’s oldest people
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4229186/
https://www.ncbi.nlm.nih.gov/pubmed/25390934
http://dx.doi.org/10.1371/journal.pone.0112430
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