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A method for generating large datasets of organ geometries for radiotherapy treatment planning studies
BACKGROUND: With the rapidly increasing application of adaptive radiotherapy, large datasets of organ geometries based on the patient’s anatomy are desired to support clinical application or research work, such as image segmentation, re-planning, and organ deformation analysis. Sometimes only limite...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Versita, Warsaw
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4230563/ https://www.ncbi.nlm.nih.gov/pubmed/25435856 http://dx.doi.org/10.2478/raon-2014-0003 |
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author | Hu, Nan Cerviño, Laura Segars, Paul Lewis, John Shan, Jinlu Jiang, Steve Zheng, Xiaolin Wang, Ge |
author_facet | Hu, Nan Cerviño, Laura Segars, Paul Lewis, John Shan, Jinlu Jiang, Steve Zheng, Xiaolin Wang, Ge |
author_sort | Hu, Nan |
collection | PubMed |
description | BACKGROUND: With the rapidly increasing application of adaptive radiotherapy, large datasets of organ geometries based on the patient’s anatomy are desired to support clinical application or research work, such as image segmentation, re-planning, and organ deformation analysis. Sometimes only limited datasets are available in clinical practice. In this study, we propose a new method to generate large datasets of organ geometries to be utilized in adaptive radiotherapy. METHODS: Given a training dataset of organ shapes derived from daily cone-beam CT, we align them into a common coordinate frame and select one of the training surfaces as reference surface. A statistical shape model of organs was constructed, based on the establishment of point correspondence between surfaces and non-uniform rational B-spline (NURBS) representation. A principal component analysis is performed on the sampled surface points to capture the major variation modes of each organ. RESULTS: A set of principal components and their respective coefficients, which represent organ surface deformation, were obtained, and a statistical analysis of the coefficients was performed. New sets of statistically equivalent coefficients can be constructed and assigned to the principal components, resulting in a larger geometry dataset for the patient’s organs. CONCLUSIONS: These generated organ geometries are realistic and statistically representative. |
format | Online Article Text |
id | pubmed-4230563 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Versita, Warsaw |
record_format | MEDLINE/PubMed |
spelling | pubmed-42305632014-12-01 A method for generating large datasets of organ geometries for radiotherapy treatment planning studies Hu, Nan Cerviño, Laura Segars, Paul Lewis, John Shan, Jinlu Jiang, Steve Zheng, Xiaolin Wang, Ge Radiol Oncol Research Article BACKGROUND: With the rapidly increasing application of adaptive radiotherapy, large datasets of organ geometries based on the patient’s anatomy are desired to support clinical application or research work, such as image segmentation, re-planning, and organ deformation analysis. Sometimes only limited datasets are available in clinical practice. In this study, we propose a new method to generate large datasets of organ geometries to be utilized in adaptive radiotherapy. METHODS: Given a training dataset of organ shapes derived from daily cone-beam CT, we align them into a common coordinate frame and select one of the training surfaces as reference surface. A statistical shape model of organs was constructed, based on the establishment of point correspondence between surfaces and non-uniform rational B-spline (NURBS) representation. A principal component analysis is performed on the sampled surface points to capture the major variation modes of each organ. RESULTS: A set of principal components and their respective coefficients, which represent organ surface deformation, were obtained, and a statistical analysis of the coefficients was performed. New sets of statistically equivalent coefficients can be constructed and assigned to the principal components, resulting in a larger geometry dataset for the patient’s organs. CONCLUSIONS: These generated organ geometries are realistic and statistically representative. Versita, Warsaw 2014-11-05 /pmc/articles/PMC4230563/ /pubmed/25435856 http://dx.doi.org/10.2478/raon-2014-0003 Text en Copyright © by Association of Radiology & Oncology http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Research Article Hu, Nan Cerviño, Laura Segars, Paul Lewis, John Shan, Jinlu Jiang, Steve Zheng, Xiaolin Wang, Ge A method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
title | A method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
title_full | A method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
title_fullStr | A method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
title_full_unstemmed | A method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
title_short | A method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
title_sort | method for generating large datasets of organ geometries for radiotherapy treatment planning studies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4230563/ https://www.ncbi.nlm.nih.gov/pubmed/25435856 http://dx.doi.org/10.2478/raon-2014-0003 |
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