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Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane

Two haloalkane dehalogenases, LinB(UT) and LinB(MI), each with 296 amino acid residues, exhibit only seven amino acid residue differences between them, but LinB(MI)’s catalytic performance towards β-hexachlorocyclohexane (β-HCH) is considerably higher than LinB(UT)’s. To elucidate the molecular basi...

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Autores principales: Moriuchi, Ryota, Tanaka, Hiroki, Nikawadori, Yuki, Ishitsuka, Mayuko, Ito, Michihiro, Ohtsubo, Yoshiyuki, Tsuda, Masataka, Damborsky, Jiri, Prokop, Zbynek, Nagata, Yuji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4230811/
https://www.ncbi.nlm.nih.gov/pubmed/25401073
http://dx.doi.org/10.1186/s13568-014-0072-5
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author Moriuchi, Ryota
Tanaka, Hiroki
Nikawadori, Yuki
Ishitsuka, Mayuko
Ito, Michihiro
Ohtsubo, Yoshiyuki
Tsuda, Masataka
Damborsky, Jiri
Prokop, Zbynek
Nagata, Yuji
author_facet Moriuchi, Ryota
Tanaka, Hiroki
Nikawadori, Yuki
Ishitsuka, Mayuko
Ito, Michihiro
Ohtsubo, Yoshiyuki
Tsuda, Masataka
Damborsky, Jiri
Prokop, Zbynek
Nagata, Yuji
author_sort Moriuchi, Ryota
collection PubMed
description Two haloalkane dehalogenases, LinB(UT) and LinB(MI), each with 296 amino acid residues, exhibit only seven amino acid residue differences between them, but LinB(MI)’s catalytic performance towards β-hexachlorocyclohexane (β-HCH) is considerably higher than LinB(UT)’s. To elucidate the molecular basis governing this difference, intermediate mutants between LinB(UT) and LinB(MI) were constructed and kinetically characterized. The activities of LinB(UT)-based mutants gradually increased by cumulative mutations into LinB(UT), and the effects of the individual amino acid substitutions depended on combination with other mutations. These results indicated that LinB(UT)’s β-HCH degradation activity can be enhanced in a stepwise manner by the accumulation of point mutations.
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spelling pubmed-42308112014-12-11 Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane Moriuchi, Ryota Tanaka, Hiroki Nikawadori, Yuki Ishitsuka, Mayuko Ito, Michihiro Ohtsubo, Yoshiyuki Tsuda, Masataka Damborsky, Jiri Prokop, Zbynek Nagata, Yuji AMB Express Original Article Two haloalkane dehalogenases, LinB(UT) and LinB(MI), each with 296 amino acid residues, exhibit only seven amino acid residue differences between them, but LinB(MI)’s catalytic performance towards β-hexachlorocyclohexane (β-HCH) is considerably higher than LinB(UT)’s. To elucidate the molecular basis governing this difference, intermediate mutants between LinB(UT) and LinB(MI) were constructed and kinetically characterized. The activities of LinB(UT)-based mutants gradually increased by cumulative mutations into LinB(UT), and the effects of the individual amino acid substitutions depended on combination with other mutations. These results indicated that LinB(UT)’s β-HCH degradation activity can be enhanced in a stepwise manner by the accumulation of point mutations. Springer 2014-09-21 /pmc/articles/PMC4230811/ /pubmed/25401073 http://dx.doi.org/10.1186/s13568-014-0072-5 Text en Copyright © 2014 Moriuchi et al.; licensee Springer. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited.
spellingShingle Original Article
Moriuchi, Ryota
Tanaka, Hiroki
Nikawadori, Yuki
Ishitsuka, Mayuko
Ito, Michihiro
Ohtsubo, Yoshiyuki
Tsuda, Masataka
Damborsky, Jiri
Prokop, Zbynek
Nagata, Yuji
Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane
title Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane
title_full Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane
title_fullStr Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane
title_full_unstemmed Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane
title_short Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane
title_sort stepwise enhancement of catalytic performance of haloalkane dehalogenase linb towards β-hexachlorocyclohexane
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4230811/
https://www.ncbi.nlm.nih.gov/pubmed/25401073
http://dx.doi.org/10.1186/s13568-014-0072-5
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