Cargando…

Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China

Previously, a series of Simocephalus taxa (Cladocera: Daphniidae) from China were described. Most were proposed to be junior synonyms in the last revision of the genus. Using original material from China and data from GenBank, we investigate the biodiversity and phylogeny of Simocephalus using seque...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Xiaona, Shi, Xinlu, Kotov, Alexey A., Gu, Fukang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4231159/
https://www.ncbi.nlm.nih.gov/pubmed/25393020
http://dx.doi.org/10.1371/journal.pone.0112808
_version_ 1782344394228105216
author Huang, Xiaona
Shi, Xinlu
Kotov, Alexey A.
Gu, Fukang
author_facet Huang, Xiaona
Shi, Xinlu
Kotov, Alexey A.
Gu, Fukang
author_sort Huang, Xiaona
collection PubMed
description Previously, a series of Simocephalus taxa (Cladocera: Daphniidae) from China were described. Most were proposed to be junior synonyms in the last revision of the genus. Using original material from China and data from GenBank, we investigate the biodiversity and phylogeny of Simocephalus using sequences of the cytochrome c oxidase subunit I (COI) and the nuclear 18S genes. In both cases, neighbor-joining, maximum likelihood and Bayesian inference analyses led to highly congruent tree topologies. The grouping of the deeper clades agrees with the inter-generic classification of Orlova-Bienkowskaja (2001). Only the populations of S. serrulatus from Eurasia and North America seem to be closely related, and there are no other shared species between the two continents. Our study unambiguously confirms the existence of many lineages from the subgenera of Simocephalus (Echinocaudus) and Simocephalus s.str. in China, but their morphology needs to be reexamined by taking a wider range of characters (e.g., of female thoracic limbs and adult males) into consideration.
format Online
Article
Text
id pubmed-4231159
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-42311592014-11-18 Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China Huang, Xiaona Shi, Xinlu Kotov, Alexey A. Gu, Fukang PLoS One Research Article Previously, a series of Simocephalus taxa (Cladocera: Daphniidae) from China were described. Most were proposed to be junior synonyms in the last revision of the genus. Using original material from China and data from GenBank, we investigate the biodiversity and phylogeny of Simocephalus using sequences of the cytochrome c oxidase subunit I (COI) and the nuclear 18S genes. In both cases, neighbor-joining, maximum likelihood and Bayesian inference analyses led to highly congruent tree topologies. The grouping of the deeper clades agrees with the inter-generic classification of Orlova-Bienkowskaja (2001). Only the populations of S. serrulatus from Eurasia and North America seem to be closely related, and there are no other shared species between the two continents. Our study unambiguously confirms the existence of many lineages from the subgenera of Simocephalus (Echinocaudus) and Simocephalus s.str. in China, but their morphology needs to be reexamined by taking a wider range of characters (e.g., of female thoracic limbs and adult males) into consideration. Public Library of Science 2014-11-13 /pmc/articles/PMC4231159/ /pubmed/25393020 http://dx.doi.org/10.1371/journal.pone.0112808 Text en © 2014 Huang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Huang, Xiaona
Shi, Xinlu
Kotov, Alexey A.
Gu, Fukang
Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China
title Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China
title_full Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China
title_fullStr Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China
title_full_unstemmed Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China
title_short Confirmation through Genetic Analysis of the Existence of Many Local Phyloclades of the Genus Simocephalus (Crustacea, Cladocera) in China
title_sort confirmation through genetic analysis of the existence of many local phyloclades of the genus simocephalus (crustacea, cladocera) in china
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4231159/
https://www.ncbi.nlm.nih.gov/pubmed/25393020
http://dx.doi.org/10.1371/journal.pone.0112808
work_keys_str_mv AT huangxiaona confirmationthroughgeneticanalysisoftheexistenceofmanylocalphylocladesofthegenussimocephaluscrustaceacladocerainchina
AT shixinlu confirmationthroughgeneticanalysisoftheexistenceofmanylocalphylocladesofthegenussimocephaluscrustaceacladocerainchina
AT kotovalexeya confirmationthroughgeneticanalysisoftheexistenceofmanylocalphylocladesofthegenussimocephaluscrustaceacladocerainchina
AT gufukang confirmationthroughgeneticanalysisoftheexistenceofmanylocalphylocladesofthegenussimocephaluscrustaceacladocerainchina