FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus

A new functional gene database, FOAM (Functional Ontology Assignments for Metagenomes), was developed to screen environmental metagenomic sequence datasets. FOAM provides a new functional ontology dedicated to classify gene functions relevant to environmental microorganisms based on Hidden Markov Mo...

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Detalles Bibliográficos
Autores principales: Prestat, Emmanuel, David, Maude M., Hultman, Jenni, Taş, Neslihan, Lamendella, Regina, Dvornik, Jill, Mackelprang, Rachel, Myrold, David D., Jumpponen, Ari, Tringe, Susannah G., Holman, Elizabeth, Mavromatis, Konstantinos, Jansson, Janet K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Methods Online
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4231724/
https://www.ncbi.nlm.nih.gov/pubmed/25260589
http://dx.doi.org/10.1093/nar/gku702

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