Explicit DNase sequence bias modeling enables high-resolution transcription factor footprint detection

DNaseI footprinting is an established assay for identifying transcription factor (TF)–DNA interactions with single base pair resolution. High-throughput DNase-seq assays have recently been used to detect in vivo DNase footprints across the genome. Multiple computational approaches have been develope...

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Detalles Bibliográficos
Autores principales: Yardımcı, Galip Gürkan, Frank, Christopher L., Crawford, Gregory E., Ohler, Uwe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Gene regulation, Chromatin and Epigenetics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4231734/
https://www.ncbi.nlm.nih.gov/pubmed/25294828
http://dx.doi.org/10.1093/nar/gku810

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4231734/
https://www.ncbi.nlm.nih.gov/pubmed/25294828
http://dx.doi.org/10.1093/nar/gku810

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