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μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

We present the results of microsecond molecular dynamics simulations carried out by the ABC group of laboratories on a set of B-DNA oligomers containing the 136 distinct tetranucleotide base sequences. We demonstrate that the resulting trajectories have extensively sampled the conformational space a...

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Detalles Bibliográficos
Autores principales:	Pasi, Marco, Maddocks, John H., Beveridge, David, Bishop, Thomas C., Case, David A., Cheatham, Thomas, Dans, Pablo D., Jayaram, B., Lankas, Filip, Laughton, Charles, Mitchell, Jonathan, Osman, Roman, Orozco, Modesto, Pérez, Alberto, Petkevičiūtė, Daiva, Spackova, Nada, Sponer, Jiri, Zakrzewska, Krystyna, Lavery, Richard
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4231739/ https://www.ncbi.nlm.nih.gov/pubmed/25260586 http://dx.doi.org/10.1093/nar/gku855

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