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Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**

The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additi...

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Detalles Bibliográficos
Autores principales: Kotyrba, Ursula M, Pröpper, Kevin, Sachs, Eike-F, Myanovska, Anastasiya, Joppe, Tobias, Lissy, Friederike, Sheldrick, George M, Koszinowski, Konrad, Diederichsen, Ulf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4232271/
https://www.ncbi.nlm.nih.gov/pubmed/25478311
http://dx.doi.org/10.1002/open.201400001
Descripción
Sumario:The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additional recognition units in between. Thus, four nucleobase recognition units are organized on a rigid template, well suited for DNA double strand interactions. The new tetra-nucleobase binders are synthesized as aza-TANDEM derivatives lacking the N-methylation of triostin A and based on a cyclopeptide backbone. Synthesis of two tetra-nucleobase aza-TANDEM derivatives is established, DNA interaction analyzed by microscale thermophoresis, cytotoxic activity studied and a nucleobase sequence dependent self-aggregation investigated by mass spectrometry.