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Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additi...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4232271/ https://www.ncbi.nlm.nih.gov/pubmed/25478311 http://dx.doi.org/10.1002/open.201400001 |
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author | Kotyrba, Ursula M Pröpper, Kevin Sachs, Eike-F Myanovska, Anastasiya Joppe, Tobias Lissy, Friederike Sheldrick, George M Koszinowski, Konrad Diederichsen, Ulf |
author_facet | Kotyrba, Ursula M Pröpper, Kevin Sachs, Eike-F Myanovska, Anastasiya Joppe, Tobias Lissy, Friederike Sheldrick, George M Koszinowski, Konrad Diederichsen, Ulf |
author_sort | Kotyrba, Ursula M |
collection | PubMed |
description | The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additional recognition units in between. Thus, four nucleobase recognition units are organized on a rigid template, well suited for DNA double strand interactions. The new tetra-nucleobase binders are synthesized as aza-TANDEM derivatives lacking the N-methylation of triostin A and based on a cyclopeptide backbone. Synthesis of two tetra-nucleobase aza-TANDEM derivatives is established, DNA interaction analyzed by microscale thermophoresis, cytotoxic activity studied and a nucleobase sequence dependent self-aggregation investigated by mass spectrometry. |
format | Online Article Text |
id | pubmed-4232271 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-42322712014-12-04 Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** Kotyrba, Ursula M Pröpper, Kevin Sachs, Eike-F Myanovska, Anastasiya Joppe, Tobias Lissy, Friederike Sheldrick, George M Koszinowski, Konrad Diederichsen, Ulf ChemistryOpen Full Papers The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additional recognition units in between. Thus, four nucleobase recognition units are organized on a rigid template, well suited for DNA double strand interactions. The new tetra-nucleobase binders are synthesized as aza-TANDEM derivatives lacking the N-methylation of triostin A and based on a cyclopeptide backbone. Synthesis of two tetra-nucleobase aza-TANDEM derivatives is established, DNA interaction analyzed by microscale thermophoresis, cytotoxic activity studied and a nucleobase sequence dependent self-aggregation investigated by mass spectrometry. Blackwell Publishing Ltd 2014-08 2014-07-09 /pmc/articles/PMC4232271/ /pubmed/25478311 http://dx.doi.org/10.1002/open.201400001 Text en © 2014 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. http://creativecommons.org/licenses/by-nc/3.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Full Papers Kotyrba, Ursula M Pröpper, Kevin Sachs, Eike-F Myanovska, Anastasiya Joppe, Tobias Lissy, Friederike Sheldrick, George M Koszinowski, Konrad Diederichsen, Ulf Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** |
title | Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** |
title_full | Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** |
title_fullStr | Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** |
title_full_unstemmed | Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** |
title_short | Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** |
title_sort | triostin a derived cyclopeptide as architectural template for the alignment of four recognition units** |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4232271/ https://www.ncbi.nlm.nih.gov/pubmed/25478311 http://dx.doi.org/10.1002/open.201400001 |
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