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Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**

The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additi...

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Autores principales: Kotyrba, Ursula M, Pröpper, Kevin, Sachs, Eike-F, Myanovska, Anastasiya, Joppe, Tobias, Lissy, Friederike, Sheldrick, George M, Koszinowski, Konrad, Diederichsen, Ulf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4232271/
https://www.ncbi.nlm.nih.gov/pubmed/25478311
http://dx.doi.org/10.1002/open.201400001
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author Kotyrba, Ursula M
Pröpper, Kevin
Sachs, Eike-F
Myanovska, Anastasiya
Joppe, Tobias
Lissy, Friederike
Sheldrick, George M
Koszinowski, Konrad
Diederichsen, Ulf
author_facet Kotyrba, Ursula M
Pröpper, Kevin
Sachs, Eike-F
Myanovska, Anastasiya
Joppe, Tobias
Lissy, Friederike
Sheldrick, George M
Koszinowski, Konrad
Diederichsen, Ulf
author_sort Kotyrba, Ursula M
collection PubMed
description The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additional recognition units in between. Thus, four nucleobase recognition units are organized on a rigid template, well suited for DNA double strand interactions. The new tetra-nucleobase binders are synthesized as aza-TANDEM derivatives lacking the N-methylation of triostin A and based on a cyclopeptide backbone. Synthesis of two tetra-nucleobase aza-TANDEM derivatives is established, DNA interaction analyzed by microscale thermophoresis, cytotoxic activity studied and a nucleobase sequence dependent self-aggregation investigated by mass spectrometry.
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spelling pubmed-42322712014-12-04 Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units** Kotyrba, Ursula M Pröpper, Kevin Sachs, Eike-F Myanovska, Anastasiya Joppe, Tobias Lissy, Friederike Sheldrick, George M Koszinowski, Konrad Diederichsen, Ulf ChemistryOpen Full Papers The DNA bisintercalator triostin A is structurally based on a disulfide-bridged depsipeptide scaffold that provides preorganization of two quinoxaline units in 10.5 Å distance. Triostin A analogues are synthesized with nucleobase recognition units replacing the quinoxalines and containing two additional recognition units in between. Thus, four nucleobase recognition units are organized on a rigid template, well suited for DNA double strand interactions. The new tetra-nucleobase binders are synthesized as aza-TANDEM derivatives lacking the N-methylation of triostin A and based on a cyclopeptide backbone. Synthesis of two tetra-nucleobase aza-TANDEM derivatives is established, DNA interaction analyzed by microscale thermophoresis, cytotoxic activity studied and a nucleobase sequence dependent self-aggregation investigated by mass spectrometry. Blackwell Publishing Ltd 2014-08 2014-07-09 /pmc/articles/PMC4232271/ /pubmed/25478311 http://dx.doi.org/10.1002/open.201400001 Text en © 2014 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. http://creativecommons.org/licenses/by-nc/3.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Full Papers
Kotyrba, Ursula M
Pröpper, Kevin
Sachs, Eike-F
Myanovska, Anastasiya
Joppe, Tobias
Lissy, Friederike
Sheldrick, George M
Koszinowski, Konrad
Diederichsen, Ulf
Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
title Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
title_full Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
title_fullStr Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
title_full_unstemmed Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
title_short Triostin A Derived Cyclopeptide as Architectural Template for the Alignment of Four Recognition Units**
title_sort triostin a derived cyclopeptide as architectural template for the alignment of four recognition units**
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4232271/
https://www.ncbi.nlm.nih.gov/pubmed/25478311
http://dx.doi.org/10.1002/open.201400001
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