Cargando…

New developments in the ATSAS program package for small-angle scattering data analysis

New developments in the program package ATSAS (version 2.4) for the processing and analysis of isotropic small-angle X-ray and neutron scattering data are described. They include (i) multiplatform data manipulation and display tools, (ii) programs for automated data processing and calculation of ove...

Descripción completa

Detalles Bibliográficos
Autores principales:	Petoukhov, Maxim V., Franke, Daniel, Shkumatov, Alexander V., Tria, Giancarlo, Kikhney, Alexey G., Gajda, Michal, Gorba, Christian, Mertens, Haydyn D. T., Konarev, Petr V., Svergun, Dmitri I.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	International Union of Crystallography 2012
Materias:	Computer Programs
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4233345/ https://www.ncbi.nlm.nih.gov/pubmed/25484842 http://dx.doi.org/10.1107/S0021889812007662

Ejemplares similares

ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis
por: Manalastas-Cantos, Karen, et al.
Publicado: (2021)

ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions
por: Franke, D., et al.
Publicado: (2017)

Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data
por: Konarev, Petr V., et al.
Publicado: (2021)

DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering
por: Franke, Daniel, et al.
Publicado: (2009)

Simulation of small-angle X-ray scattering data of biological macromolecules in solution
por: Franke, Daniel, et al.
Publicado: (2020)

Integrated beamline control and data acquisition for small-angle X-ray scattering at the P12 BioSAXS beamline at PETRAIII storage ring DESY
por: Hajizadeh, Nelly R., et al.
Publicado: (2018)

Advanced ensemble modelling of flexible macromolecules using X-ray solution scattering
por: Tria, Giancarlo, et al.
Publicado: (2015)

Direct shape determination of intermediates in evolving macromolecular solutions from small-angle scattering data
por: Konarev, Petr V., et al.
Publicado: (2018)

Rapid automated superposition of shapes and macromolecular models using spherical harmonics
por: Konarev, Petr V., et al.
Publicado: (2016)

A posteriori determination of the useful data range for small-angle scattering experiments on dilute monodisperse systems
por: Konarev, Petr V., et al.
Publicado: (2015)

Combining NMR and small angle X-ray scattering for the study of biomolecular structure and dynamics
por: Mertens, Haydyn D.T., et al.
Publicado: (2017)

A customizable software for fast reduction and analysis of large X-ray scattering data sets: applications of the new DPDAK package to small-angle X-ray scattering and grazing-incidence small-angle X-ray scattering
por: Benecke, Gunthard, et al.
Publicado: (2014)

DARA: a web server for rapid search of structural neighbours using solution small angle X-ray scattering data
por: Kikhney, Alexey G., et al.
Publicado: (2016)

Facilitating model reconstruction for single-particle scattering using small-angle X-ray scattering methods
por: Ma, Shufen, et al.
Publicado: (2016)

Processing two-dimensional X-ray diffraction and small-angle scattering data in DAWN 2
por: Filik, J., et al.
Publicado: (2017)

SASBDB, a repository for biological small-angle scattering data
por: Valentini, Erica, et al.
Publicado: (2014)

MATSAS: a small-angle scattering computing tool for porous systems
por: Rezaeyan, Amirsaman, et al.
Publicado: (2021)

FAIR and scalable management of small-angle X-ray scattering data
por: Giess, Torsten, et al.
Publicado: (2023)

Graphical reduction and analysis small-angle neutron scattering program: GRASP
por: Dewhurst, C. D.
Publicado: (2023)

BornAgain: software for simulating and fitting grazing-incidence small-angle scattering
por: Pospelov, Gennady, et al.
Publicado: (2020)

SCT: a suite of programs for comparing atomistic models with small-angle scattering data
por: Wright, David W., et al.
Publicado: (2015)

Updates in SASfit for fitting analytical expressions and numerical models to small-angle scattering patterns
por: Kohlbrecher, Joachim, et al.
Publicado: (2022)

Fine-tuning of intrinsic N-Oct-3 POU domain allostery by regulatory DNA targets
por: Alazard, Robert, et al.
Publicado: (2007)

GENFIT: software for the analysis of small-angle X-ray and neutron scattering data of macromolecules in solution
por: Spinozzi, Francesco, et al.
Publicado: (2014)

SASfit: a tool for small-angle scattering data analysis using a library of analytical expressions
por: Breßler, Ingo, et al.
Publicado: (2015)

Small Angle X-Ray Scattering Studies of Mitochondrial Glutaminase C Reveal Extended Flexible Regions, and Link Oligomeric State with Enzyme Activity
por: Møller, Magda, et al.
Publicado: (2013)

Flexibility of the Linker between the Domains of DNA Methyltransferase SsoII Revealed by Small-Angle X-Ray Scattering: Implications for Transcription Regulation in SsoII Restriction–Modification System
por: Konarev, Petr V., et al.
Publicado: (2014)

Correction: Small Angle X-Ray Scattering Studies of Mitochondrial Glutaminase C Reveal Extended Flexible Regions, and Link Oligomeric State with Enzyme Activity
por: Møller, Magda, et al.
Publicado: (2013)

BioXTAS RAW: improvements to a free open-source program for small-angle X-ray scattering data reduction and analysis
por: Hopkins, Jesse Bennett, et al.
Publicado: (2017)

MuMag2022: a software tool for analyzing magnetic field dependent unpolarized small-angle neutron scattering data of bulk ferromagnets
por: Adams, Michael P., et al.
Publicado: (2022)

Shape2SAS: a web application to simulate small-angle scattering data and pair distance distributions from user-defined shapes
por: Larsen, Andreas Haahr, et al.
Publicado: (2023)

Endophilin-A1 BAR domain interaction with arachidonyl CoA
por: Petoukhov, Maxim V., et al.
Publicado: (2014)

PyPhase – a Python package for X-ray phase imaging
por: Langer, Max, et al.
Publicado: (2021)

Nebula: reconstruction and visualization of scattering data in reciprocal space
por: Reiten, Andreas, et al.
Publicado: (2015)

An automated data processing and analysis pipeline for transmembrane proteins in detergent solutions
por: Molodenskiy, Dmitry S., et al.
Publicado: (2020)

PyQCstrc.ico: a computing package for structural modelling of icosahedral quasicrystals
por: Yamada, Tsunetomo
Publicado: (2021)

Pixel calculations using Orca or GAUSSIAN for electron density automated within the Oscail package
por: McArdle, Patrick
Publicado: (2021)

inserexs: reflection choice software for resonant elastic X-ray scattering
por: Peña Corredor, Antonio, et al.
Publicado: (2023)

McSAS: software for the retrieval of model parameter distributions from scattering patterns
por: Bressler, I., et al.
Publicado: (2015)

AXEAP: a software package for X-ray emission data analysis using unsupervised machine learning
por: Hwang, In-Hui, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_lfbb53an6r72clhj7hcup6jkb8