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Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing
ABSTRACT: Analysis of sinusoidal noisy leaky integrate-and-fire models and comparison with experimental data are important to understand the neural code and neural synchronization and rhythms. In this paper, we propose two methods to estimate input parameters using interspike interval data only. One...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4234988/ https://www.ncbi.nlm.nih.gov/pubmed/24742022 http://dx.doi.org/10.1186/2190-8567-4-4 |
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author | Iolov, Alexandre Ditlevsen, Susanne Longtin, André |
author_facet | Iolov, Alexandre Ditlevsen, Susanne Longtin, André |
author_sort | Iolov, Alexandre |
collection | PubMed |
description | ABSTRACT: Analysis of sinusoidal noisy leaky integrate-and-fire models and comparison with experimental data are important to understand the neural code and neural synchronization and rhythms. In this paper, we propose two methods to estimate input parameters using interspike interval data only. One is based on numerical solutions of the Fokker–Planck equation, and the other is based on an integral equation, which is fulfilled by the interspike interval probability density. This generalizes previous methods tailored to stationary data to the case of time-dependent input. The main contribution is a binning method to circumvent the problems of nonstationarity, and an easy-to-implement initializer for the numerical procedures. The methods are compared on simulated data. LIST OF ABBREVIATIONS: LIF: Leaky integrate-and-fire ISI: Interspike interval SDE: Stochastic differential equation PDE: Partial differential equation |
format | Online Article Text |
id | pubmed-4234988 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Springer |
record_format | MEDLINE/PubMed |
spelling | pubmed-42349882014-11-19 Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing Iolov, Alexandre Ditlevsen, Susanne Longtin, André J Math Neurosci Research ABSTRACT: Analysis of sinusoidal noisy leaky integrate-and-fire models and comparison with experimental data are important to understand the neural code and neural synchronization and rhythms. In this paper, we propose two methods to estimate input parameters using interspike interval data only. One is based on numerical solutions of the Fokker–Planck equation, and the other is based on an integral equation, which is fulfilled by the interspike interval probability density. This generalizes previous methods tailored to stationary data to the case of time-dependent input. The main contribution is a binning method to circumvent the problems of nonstationarity, and an easy-to-implement initializer for the numerical procedures. The methods are compared on simulated data. LIST OF ABBREVIATIONS: LIF: Leaky integrate-and-fire ISI: Interspike interval SDE: Stochastic differential equation PDE: Partial differential equation Springer 2014-04-17 /pmc/articles/PMC4234988/ /pubmed/24742022 http://dx.doi.org/10.1186/2190-8567-4-4 Text en Copyright © 2014 A. Iolov et al.; licensee Springer http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Iolov, Alexandre Ditlevsen, Susanne Longtin, André Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing |
title | Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing |
title_full | Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing |
title_fullStr | Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing |
title_full_unstemmed | Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing |
title_short | Fokker–Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing |
title_sort | fokker–planck and fortet equation-based parameter estimation for a leaky integrate-and-fire model with sinusoidal and stochastic forcing |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4234988/ https://www.ncbi.nlm.nih.gov/pubmed/24742022 http://dx.doi.org/10.1186/2190-8567-4-4 |
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