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A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides

Background: Although cytological screening for cervical precancers has led to a reduction of cervical cancer incidence worldwide it is a subjective and variable method with low single-test sensitivity. New biomarkers like p16 that specifically highlight abnormal cervical cells can improve cytology p...

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Autores principales: Grabe, Niels, Lahrmann, Bernd, Pommerencke, Thora, von Knebel Doeberitz, Magnus, Reuschenbach, Miriam, Wentzensen, Nicolas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237613/
https://www.ncbi.nlm.nih.gov/pubmed/20208139
http://dx.doi.org/10.3233/CLO-2009-0508
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author Grabe, Niels
Lahrmann, Bernd
Pommerencke, Thora
von Knebel Doeberitz, Magnus
Reuschenbach, Miriam
Wentzensen, Nicolas
author_facet Grabe, Niels
Lahrmann, Bernd
Pommerencke, Thora
von Knebel Doeberitz, Magnus
Reuschenbach, Miriam
Wentzensen, Nicolas
author_sort Grabe, Niels
collection PubMed
description Background: Although cytological screening for cervical precancers has led to a reduction of cervical cancer incidence worldwide it is a subjective and variable method with low single-test sensitivity. New biomarkers like p16 that specifically highlight abnormal cervical cells can improve cytology performance. Virtual microscopy offers an ideal platform for assisted evaluation and archiving of biomarker-stained slides. Methods: We first performed a quantitative analysis of p16-stained slides digitized with the Hamamatsu NDP slide scanner. From the results an automated algorithm was created to reliably detect cells, nuclei and p16-stained cells. The algorithm's performance was evaluated on two complete slides and tiles from 52 independent slides (11,628, 4094 and 25,619 cells/clusters, respectively). Results: We achieved excellent performance to discriminate unstained cells from nuclei and biomarker-stained cells. The automated algorithm showed a high overall and positive agreement (99.0–99.7% and 70.9–83.4%, respectively) with the gold standard and had a very high sensitivity (89.1–100.0%) and specificity (98.9–100.0%) to detect biomarker-stained cells. Conclusions: We implemented a virtual microscopy system allowing highly efficient automated prescreening and archiving of biomarker-stained slides. Based on the initial results, we will evaluate the performance of our system in large epidemiologic studies against disease endpoints.
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spelling pubmed-42376132014-11-19 A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides Grabe, Niels Lahrmann, Bernd Pommerencke, Thora von Knebel Doeberitz, Magnus Reuschenbach, Miriam Wentzensen, Nicolas Cell Oncol Other Background: Although cytological screening for cervical precancers has led to a reduction of cervical cancer incidence worldwide it is a subjective and variable method with low single-test sensitivity. New biomarkers like p16 that specifically highlight abnormal cervical cells can improve cytology performance. Virtual microscopy offers an ideal platform for assisted evaluation and archiving of biomarker-stained slides. Methods: We first performed a quantitative analysis of p16-stained slides digitized with the Hamamatsu NDP slide scanner. From the results an automated algorithm was created to reliably detect cells, nuclei and p16-stained cells. The algorithm's performance was evaluated on two complete slides and tiles from 52 independent slides (11,628, 4094 and 25,619 cells/clusters, respectively). Results: We achieved excellent performance to discriminate unstained cells from nuclei and biomarker-stained cells. The automated algorithm showed a high overall and positive agreement (99.0–99.7% and 70.9–83.4%, respectively) with the gold standard and had a very high sensitivity (89.1–100.0%) and specificity (98.9–100.0%) to detect biomarker-stained cells. Conclusions: We implemented a virtual microscopy system allowing highly efficient automated prescreening and archiving of biomarker-stained slides. Based on the initial results, we will evaluate the performance of our system in large epidemiologic studies against disease endpoints. IOS Press 2010 2010-02-04 /pmc/articles/PMC4237613/ /pubmed/20208139 http://dx.doi.org/10.3233/CLO-2009-0508 Text en Copyright © 2010 Hindawi Publishing Corporation and the authors.
spellingShingle Other
Grabe, Niels
Lahrmann, Bernd
Pommerencke, Thora
von Knebel Doeberitz, Magnus
Reuschenbach, Miriam
Wentzensen, Nicolas
A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides
title A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides
title_full A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides
title_fullStr A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides
title_full_unstemmed A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides
title_short A Virtual Microscopy System to Scan, Evaluate and Archive Biomarker Enhanced Cervical Cytology Slides
title_sort virtual microscopy system to scan, evaluate and archive biomarker enhanced cervical cytology slides
topic Other
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237613/
https://www.ncbi.nlm.nih.gov/pubmed/20208139
http://dx.doi.org/10.3233/CLO-2009-0508
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