SRST2: Rapid genomic surveillance for public health and hospital microbiology labs

Rapid molecular typing of bacterial pathogens is critical for public health epidemiology, surveillance and infection control, yet routine use of whole genome sequencing (WGS) for these purposes poses significant challenges. Here we present SRST2, a read mapping-based tool for fast and accurate detec...

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Detalles Bibliográficos
Autores principales: Inouye, Michael, Dashnow, Harriet, Raven, Lesley-Ann, Schultz, Mark B, Pope, Bernard J, Tomita, Takehiro, Zobel, Justin, Holt, Kathryn E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237778/
https://www.ncbi.nlm.nih.gov/pubmed/25422674
http://dx.doi.org/10.1186/s13073-014-0090-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237778/
https://www.ncbi.nlm.nih.gov/pubmed/25422674
http://dx.doi.org/10.1186/s13073-014-0090-6

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