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Gene expression and fractionation resistance
BACKGROUND: Previous work on whole genome doubling in plants established the importance of gene functional category in provoking or suppressing duplicate gene loss, or fractionation. Other studies, particularly in Paramecium have correlated levels of gene expression with vulnerability or resistance...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4239561/ https://www.ncbi.nlm.nih.gov/pubmed/25573431 http://dx.doi.org/10.1186/1471-2164-15-S6-S19 |
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author | Chen, Eric CH Sankoff, David |
author_facet | Chen, Eric CH Sankoff, David |
author_sort | Chen, Eric CH |
collection | PubMed |
description | BACKGROUND: Previous work on whole genome doubling in plants established the importance of gene functional category in provoking or suppressing duplicate gene loss, or fractionation. Other studies, particularly in Paramecium have correlated levels of gene expression with vulnerability or resistance to duplicate loss. RESULTS: Here we analyze the simultaneous effect of function category and expression in two plant data sets, rosids and asterids. CONCLUSION: We demonstrate function category and expression level have independent effects, though expression does not play the dominant role it does in Paramecium. |
format | Online Article Text |
id | pubmed-4239561 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-42395612014-11-25 Gene expression and fractionation resistance Chen, Eric CH Sankoff, David BMC Genomics Research BACKGROUND: Previous work on whole genome doubling in plants established the importance of gene functional category in provoking or suppressing duplicate gene loss, or fractionation. Other studies, particularly in Paramecium have correlated levels of gene expression with vulnerability or resistance to duplicate loss. RESULTS: Here we analyze the simultaneous effect of function category and expression in two plant data sets, rosids and asterids. CONCLUSION: We demonstrate function category and expression level have independent effects, though expression does not play the dominant role it does in Paramecium. BioMed Central 2014-10-17 /pmc/articles/PMC4239561/ /pubmed/25573431 http://dx.doi.org/10.1186/1471-2164-15-S6-S19 Text en Copyright © 2014 Chen and Sankoff; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Chen, Eric CH Sankoff, David Gene expression and fractionation resistance |
title | Gene expression and fractionation resistance |
title_full | Gene expression and fractionation resistance |
title_fullStr | Gene expression and fractionation resistance |
title_full_unstemmed | Gene expression and fractionation resistance |
title_short | Gene expression and fractionation resistance |
title_sort | gene expression and fractionation resistance |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4239561/ https://www.ncbi.nlm.nih.gov/pubmed/25573431 http://dx.doi.org/10.1186/1471-2164-15-S6-S19 |
work_keys_str_mv | AT chenericch geneexpressionandfractionationresistance AT sankoffdavid geneexpressionandfractionationresistance |