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Gene expression and fractionation resistance

BACKGROUND: Previous work on whole genome doubling in plants established the importance of gene functional category in provoking or suppressing duplicate gene loss, or fractionation. Other studies, particularly in Paramecium have correlated levels of gene expression with vulnerability or resistance...

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Detalles Bibliográficos
Autores principales: Chen, Eric CH, Sankoff, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4239561/
https://www.ncbi.nlm.nih.gov/pubmed/25573431
http://dx.doi.org/10.1186/1471-2164-15-S6-S19
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author Chen, Eric CH
Sankoff, David
author_facet Chen, Eric CH
Sankoff, David
author_sort Chen, Eric CH
collection PubMed
description BACKGROUND: Previous work on whole genome doubling in plants established the importance of gene functional category in provoking or suppressing duplicate gene loss, or fractionation. Other studies, particularly in Paramecium have correlated levels of gene expression with vulnerability or resistance to duplicate loss. RESULTS: Here we analyze the simultaneous effect of function category and expression in two plant data sets, rosids and asterids. CONCLUSION: We demonstrate function category and expression level have independent effects, though expression does not play the dominant role it does in Paramecium.
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spelling pubmed-42395612014-11-25 Gene expression and fractionation resistance Chen, Eric CH Sankoff, David BMC Genomics Research BACKGROUND: Previous work on whole genome doubling in plants established the importance of gene functional category in provoking or suppressing duplicate gene loss, or fractionation. Other studies, particularly in Paramecium have correlated levels of gene expression with vulnerability or resistance to duplicate loss. RESULTS: Here we analyze the simultaneous effect of function category and expression in two plant data sets, rosids and asterids. CONCLUSION: We demonstrate function category and expression level have independent effects, though expression does not play the dominant role it does in Paramecium. BioMed Central 2014-10-17 /pmc/articles/PMC4239561/ /pubmed/25573431 http://dx.doi.org/10.1186/1471-2164-15-S6-S19 Text en Copyright © 2014 Chen and Sankoff; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Chen, Eric CH
Sankoff, David
Gene expression and fractionation resistance
title Gene expression and fractionation resistance
title_full Gene expression and fractionation resistance
title_fullStr Gene expression and fractionation resistance
title_full_unstemmed Gene expression and fractionation resistance
title_short Gene expression and fractionation resistance
title_sort gene expression and fractionation resistance
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4239561/
https://www.ncbi.nlm.nih.gov/pubmed/25573431
http://dx.doi.org/10.1186/1471-2164-15-S6-S19
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