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Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract
BACKGROUND: Inherited cataract is a clinically important and genetically heterogeneous cause of visual impairment. Typically, it presents at an early age with or without other ocular/systemic signs and lacks clear phenotype-genotype correlation rendering both clinical classification and molecular di...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4240822/ https://www.ncbi.nlm.nih.gov/pubmed/25403472 http://dx.doi.org/10.1186/s40246-014-0019-6 |
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author | Mackay, Donna S Bennett, Thomas M Culican, Susan M Shiels, Alan |
author_facet | Mackay, Donna S Bennett, Thomas M Culican, Susan M Shiels, Alan |
author_sort | Mackay, Donna S |
collection | PubMed |
description | BACKGROUND: Inherited cataract is a clinically important and genetically heterogeneous cause of visual impairment. Typically, it presents at an early age with or without other ocular/systemic signs and lacks clear phenotype-genotype correlation rendering both clinical classification and molecular diagnosis challenging. Here we have utilized trio-based whole exome sequencing to discover mutations in candidate genes underlying autosomal dominant cataract segregating in three nuclear families. RESULTS: In family A, we identified a recurrent heterozygous mutation in exon-2 of the gene encoding γD-crystallin (CRYGD; c.70C > A, p.Pro24Thr) that co-segregated with ‘coralliform’ lens opacities. Families B and C were found to harbor different novel variants in exon-2 of the gene coding for gap-junction protein α8 (GJA8; c.20T > C, p.Leu7Pro and c.293A > C, p.His98Pro). Each novel variant co-segregated with disease and was predicted in silico to have damaging effects on protein function. CONCLUSIONS: Exome sequencing facilitates concurrent mutation-profiling of the burgeoning list of candidate genes for inherited cataract, and the results can provide enhanced clinical diagnosis and genetic counseling for affected families. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40246-014-0019-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4240822 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-42408222014-11-23 Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract Mackay, Donna S Bennett, Thomas M Culican, Susan M Shiels, Alan Hum Genomics Primary Research BACKGROUND: Inherited cataract is a clinically important and genetically heterogeneous cause of visual impairment. Typically, it presents at an early age with or without other ocular/systemic signs and lacks clear phenotype-genotype correlation rendering both clinical classification and molecular diagnosis challenging. Here we have utilized trio-based whole exome sequencing to discover mutations in candidate genes underlying autosomal dominant cataract segregating in three nuclear families. RESULTS: In family A, we identified a recurrent heterozygous mutation in exon-2 of the gene encoding γD-crystallin (CRYGD; c.70C > A, p.Pro24Thr) that co-segregated with ‘coralliform’ lens opacities. Families B and C were found to harbor different novel variants in exon-2 of the gene coding for gap-junction protein α8 (GJA8; c.20T > C, p.Leu7Pro and c.293A > C, p.His98Pro). Each novel variant co-segregated with disease and was predicted in silico to have damaging effects on protein function. CONCLUSIONS: Exome sequencing facilitates concurrent mutation-profiling of the burgeoning list of candidate genes for inherited cataract, and the results can provide enhanced clinical diagnosis and genetic counseling for affected families. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40246-014-0019-6) contains supplementary material, which is available to authorized users. BioMed Central 2014-11-18 /pmc/articles/PMC4240822/ /pubmed/25403472 http://dx.doi.org/10.1186/s40246-014-0019-6 Text en © Mackay et al.; licensee BioMed Central Ltd. 2014 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Primary Research Mackay, Donna S Bennett, Thomas M Culican, Susan M Shiels, Alan Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract |
title | Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract |
title_full | Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract |
title_fullStr | Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract |
title_full_unstemmed | Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract |
title_short | Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract |
title_sort | exome sequencing identifies novel and recurrent mutations in gja8 and crygd associated with inherited cataract |
topic | Primary Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4240822/ https://www.ncbi.nlm.nih.gov/pubmed/25403472 http://dx.doi.org/10.1186/s40246-014-0019-6 |
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