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Genome sequence of mungbean and insights into evolution within Vigna species
Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. Here we construct a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis, which includes several important dietary legumes in As...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Pub. Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4241982/ https://www.ncbi.nlm.nih.gov/pubmed/25384727 http://dx.doi.org/10.1038/ncomms6443 |
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author | Kang, Yang Jae Kim, Sue K. Kim, Moon Young Lestari, Puji Kim, Kil Hyun Ha, Bo-Keun Jun, Tae Hwan Hwang, Won Joo Lee, Taeyoung Lee, Jayern Shim, Sangrea Yoon, Min Young Jang, Young Eun Han, Kwang Soo Taeprayoon, Puntaree Yoon, Na Somta, Prakit Tanya, Patcharin Kim, Kwang Soo Gwag, Jae-Gyun Moon, Jung-Kyung Lee, Yeong-Ho Park, Beom-Seok Bombarely, Aureliano Doyle, Jeffrey J. Jackson, Scott A. Schafleitner, Roland Srinives, Peerasak Varshney, Rajeev K. Lee, Suk-Ha |
author_facet | Kang, Yang Jae Kim, Sue K. Kim, Moon Young Lestari, Puji Kim, Kil Hyun Ha, Bo-Keun Jun, Tae Hwan Hwang, Won Joo Lee, Taeyoung Lee, Jayern Shim, Sangrea Yoon, Min Young Jang, Young Eun Han, Kwang Soo Taeprayoon, Puntaree Yoon, Na Somta, Prakit Tanya, Patcharin Kim, Kwang Soo Gwag, Jae-Gyun Moon, Jung-Kyung Lee, Yeong-Ho Park, Beom-Seok Bombarely, Aureliano Doyle, Jeffrey J. Jackson, Scott A. Schafleitner, Roland Srinives, Peerasak Varshney, Rajeev K. Lee, Suk-Ha |
author_sort | Kang, Yang Jae |
collection | PubMed |
description | Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. Here we construct a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis, which includes several important dietary legumes in Asia, and to enable a better understanding of the evolution of leguminous species. Based on the de novo assembly of additional wild mungbean species, the divergence of what was eventually domesticated and the sampled wild mungbean species appears to have predated domestication. Moreover, the de novo assembly of a tetraploid Vigna species (V. reflexo-pilosa var. glabra) provides genomic evidence of a recent allopolyploid event. The species tree is constructed using de novo RNA-seq assemblies of 22 accessions of 18 Vigna species and protein sets of Glycine max. The present assembly of V. radiata var. radiata will facilitate genome research and accelerate molecular breeding of the subgenus Ceratotropis. |
format | Online Article Text |
id | pubmed-4241982 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Pub. Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-42419822014-12-04 Genome sequence of mungbean and insights into evolution within Vigna species Kang, Yang Jae Kim, Sue K. Kim, Moon Young Lestari, Puji Kim, Kil Hyun Ha, Bo-Keun Jun, Tae Hwan Hwang, Won Joo Lee, Taeyoung Lee, Jayern Shim, Sangrea Yoon, Min Young Jang, Young Eun Han, Kwang Soo Taeprayoon, Puntaree Yoon, Na Somta, Prakit Tanya, Patcharin Kim, Kwang Soo Gwag, Jae-Gyun Moon, Jung-Kyung Lee, Yeong-Ho Park, Beom-Seok Bombarely, Aureliano Doyle, Jeffrey J. Jackson, Scott A. Schafleitner, Roland Srinives, Peerasak Varshney, Rajeev K. Lee, Suk-Ha Nat Commun Article Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. Here we construct a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis, which includes several important dietary legumes in Asia, and to enable a better understanding of the evolution of leguminous species. Based on the de novo assembly of additional wild mungbean species, the divergence of what was eventually domesticated and the sampled wild mungbean species appears to have predated domestication. Moreover, the de novo assembly of a tetraploid Vigna species (V. reflexo-pilosa var. glabra) provides genomic evidence of a recent allopolyploid event. The species tree is constructed using de novo RNA-seq assemblies of 22 accessions of 18 Vigna species and protein sets of Glycine max. The present assembly of V. radiata var. radiata will facilitate genome research and accelerate molecular breeding of the subgenus Ceratotropis. Nature Pub. Group 2014-11-11 /pmc/articles/PMC4241982/ /pubmed/25384727 http://dx.doi.org/10.1038/ncomms6443 Text en Copyright © 2014, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/ |
spellingShingle | Article Kang, Yang Jae Kim, Sue K. Kim, Moon Young Lestari, Puji Kim, Kil Hyun Ha, Bo-Keun Jun, Tae Hwan Hwang, Won Joo Lee, Taeyoung Lee, Jayern Shim, Sangrea Yoon, Min Young Jang, Young Eun Han, Kwang Soo Taeprayoon, Puntaree Yoon, Na Somta, Prakit Tanya, Patcharin Kim, Kwang Soo Gwag, Jae-Gyun Moon, Jung-Kyung Lee, Yeong-Ho Park, Beom-Seok Bombarely, Aureliano Doyle, Jeffrey J. Jackson, Scott A. Schafleitner, Roland Srinives, Peerasak Varshney, Rajeev K. Lee, Suk-Ha Genome sequence of mungbean and insights into evolution within Vigna species |
title | Genome sequence of mungbean and insights into evolution within Vigna species |
title_full | Genome sequence of mungbean and insights into evolution within Vigna species |
title_fullStr | Genome sequence of mungbean and insights into evolution within Vigna species |
title_full_unstemmed | Genome sequence of mungbean and insights into evolution within Vigna species |
title_short | Genome sequence of mungbean and insights into evolution within Vigna species |
title_sort | genome sequence of mungbean and insights into evolution within vigna species |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4241982/ https://www.ncbi.nlm.nih.gov/pubmed/25384727 http://dx.doi.org/10.1038/ncomms6443 |
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