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Cellulolytic potential under environmental changes in microbial communities from grassland litter

In many ecosystems, global changes are likely to profoundly affect microorganisms. In Southern California, changes in precipitation and nitrogen deposition may influence the composition and functional potential of microbial communities and their resulting ability to degrade plant material. To test w...

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Detalles Bibliográficos
Autores principales: Berlemont, Renaud, Allison, Steven D., Weihe, Claudia, Lu, Ying, Brodie, Eoin L., Martiny, Jennifer B. H., Martiny, Adam C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4243572/
https://www.ncbi.nlm.nih.gov/pubmed/25505459
http://dx.doi.org/10.3389/fmicb.2014.00639
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author Berlemont, Renaud
Allison, Steven D.
Weihe, Claudia
Lu, Ying
Brodie, Eoin L.
Martiny, Jennifer B. H.
Martiny, Adam C.
author_facet Berlemont, Renaud
Allison, Steven D.
Weihe, Claudia
Lu, Ying
Brodie, Eoin L.
Martiny, Jennifer B. H.
Martiny, Adam C.
author_sort Berlemont, Renaud
collection PubMed
description In many ecosystems, global changes are likely to profoundly affect microorganisms. In Southern California, changes in precipitation and nitrogen deposition may influence the composition and functional potential of microbial communities and their resulting ability to degrade plant material. To test whether such environmental changes impact the distribution of functional groups involved in leaf litter degradation, we determined how the genomic diversity of microbial communities in a semi-arid grassland ecosystem changed under reduced precipitation or increased N deposition. We monitored communities seasonally over a period of 2 years to place environmental change responses into the context of natural variation. Fungal and bacterial communities displayed strong seasonal patterns, Fungi being mostly detected during the dry season whereas Bacteria were common during wet periods. Most putative cellulose degraders were associated with 33 bacterial genera and predicted to constitute 18% of the microbial community. Precipitation reduction reduced bacterial abundance and cellulolytic potential whereas nitrogen addition did not affect the cellulolytic potential of the microbial community. Finally, we detected a strong correlation between the frequencies of genera of putative cellulose degraders and cellulase genes. Thus, microbial taxonomic composition was predictive of cellulolytic potential. This work provides a framework for how environmental changes affect microorganisms responsible for plant litter deconstruction.
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spelling pubmed-42435722014-12-10 Cellulolytic potential under environmental changes in microbial communities from grassland litter Berlemont, Renaud Allison, Steven D. Weihe, Claudia Lu, Ying Brodie, Eoin L. Martiny, Jennifer B. H. Martiny, Adam C. Front Microbiol Microbiology In many ecosystems, global changes are likely to profoundly affect microorganisms. In Southern California, changes in precipitation and nitrogen deposition may influence the composition and functional potential of microbial communities and their resulting ability to degrade plant material. To test whether such environmental changes impact the distribution of functional groups involved in leaf litter degradation, we determined how the genomic diversity of microbial communities in a semi-arid grassland ecosystem changed under reduced precipitation or increased N deposition. We monitored communities seasonally over a period of 2 years to place environmental change responses into the context of natural variation. Fungal and bacterial communities displayed strong seasonal patterns, Fungi being mostly detected during the dry season whereas Bacteria were common during wet periods. Most putative cellulose degraders were associated with 33 bacterial genera and predicted to constitute 18% of the microbial community. Precipitation reduction reduced bacterial abundance and cellulolytic potential whereas nitrogen addition did not affect the cellulolytic potential of the microbial community. Finally, we detected a strong correlation between the frequencies of genera of putative cellulose degraders and cellulase genes. Thus, microbial taxonomic composition was predictive of cellulolytic potential. This work provides a framework for how environmental changes affect microorganisms responsible for plant litter deconstruction. Frontiers Media S.A. 2014-11-25 /pmc/articles/PMC4243572/ /pubmed/25505459 http://dx.doi.org/10.3389/fmicb.2014.00639 Text en Copyright © 2014 Berlemont, Allison, Weihe, Lu, Brodie, Martiny and Martiny. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Berlemont, Renaud
Allison, Steven D.
Weihe, Claudia
Lu, Ying
Brodie, Eoin L.
Martiny, Jennifer B. H.
Martiny, Adam C.
Cellulolytic potential under environmental changes in microbial communities from grassland litter
title Cellulolytic potential under environmental changes in microbial communities from grassland litter
title_full Cellulolytic potential under environmental changes in microbial communities from grassland litter
title_fullStr Cellulolytic potential under environmental changes in microbial communities from grassland litter
title_full_unstemmed Cellulolytic potential under environmental changes in microbial communities from grassland litter
title_short Cellulolytic potential under environmental changes in microbial communities from grassland litter
title_sort cellulolytic potential under environmental changes in microbial communities from grassland litter
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4243572/
https://www.ncbi.nlm.nih.gov/pubmed/25505459
http://dx.doi.org/10.3389/fmicb.2014.00639
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