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Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision

We present a method for giant lipid vesicle shape analysis that combines manually guided large-scale video microscopy and computer vision algorithms to enable analyzing vesicle populations. The method retains the benefits of light microscopy and enables non-destructive analysis of vesicles from susp...

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Detalles Bibliográficos
Autores principales: Zupanc, Jernej, Drašler, Barbara, Boljte, Sabina, Kralj-Iglič, Veronika, Iglič, Aleš, Erdogmus, Deniz, Drobne, Damjana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4245123/
https://www.ncbi.nlm.nih.gov/pubmed/25426933
http://dx.doi.org/10.1371/journal.pone.0113405
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author Zupanc, Jernej
Drašler, Barbara
Boljte, Sabina
Kralj-Iglič, Veronika
Iglič, Aleš
Erdogmus, Deniz
Drobne, Damjana
author_facet Zupanc, Jernej
Drašler, Barbara
Boljte, Sabina
Kralj-Iglič, Veronika
Iglič, Aleš
Erdogmus, Deniz
Drobne, Damjana
author_sort Zupanc, Jernej
collection PubMed
description We present a method for giant lipid vesicle shape analysis that combines manually guided large-scale video microscopy and computer vision algorithms to enable analyzing vesicle populations. The method retains the benefits of light microscopy and enables non-destructive analysis of vesicles from suspensions containing up to several thousands of lipid vesicles (1–50 µm in diameter). For each sample, image analysis was employed to extract data on vesicle quantity and size distributions of their projected diameters and isoperimetric quotients (measure of contour roundness). This process enables a comparison of samples from the same population over time, or the comparison of a treated population to a control. Although vesicles in suspensions are heterogeneous in sizes and shapes and have distinctively non-homogeneous distribution throughout the suspension, this method allows for the capture and analysis of repeatable vesicle samples that are representative of the population inspected.
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spelling pubmed-42451232014-12-05 Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision Zupanc, Jernej Drašler, Barbara Boljte, Sabina Kralj-Iglič, Veronika Iglič, Aleš Erdogmus, Deniz Drobne, Damjana PLoS One Research Article We present a method for giant lipid vesicle shape analysis that combines manually guided large-scale video microscopy and computer vision algorithms to enable analyzing vesicle populations. The method retains the benefits of light microscopy and enables non-destructive analysis of vesicles from suspensions containing up to several thousands of lipid vesicles (1–50 µm in diameter). For each sample, image analysis was employed to extract data on vesicle quantity and size distributions of their projected diameters and isoperimetric quotients (measure of contour roundness). This process enables a comparison of samples from the same population over time, or the comparison of a treated population to a control. Although vesicles in suspensions are heterogeneous in sizes and shapes and have distinctively non-homogeneous distribution throughout the suspension, this method allows for the capture and analysis of repeatable vesicle samples that are representative of the population inspected. Public Library of Science 2014-11-26 /pmc/articles/PMC4245123/ /pubmed/25426933 http://dx.doi.org/10.1371/journal.pone.0113405 Text en © 2014 Zupanc et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zupanc, Jernej
Drašler, Barbara
Boljte, Sabina
Kralj-Iglič, Veronika
Iglič, Aleš
Erdogmus, Deniz
Drobne, Damjana
Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
title Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
title_full Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
title_fullStr Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
title_full_unstemmed Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
title_short Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
title_sort lipid vesicle shape analysis from populations using light video microscopy and computer vision
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4245123/
https://www.ncbi.nlm.nih.gov/pubmed/25426933
http://dx.doi.org/10.1371/journal.pone.0113405
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