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Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision
We present a method for giant lipid vesicle shape analysis that combines manually guided large-scale video microscopy and computer vision algorithms to enable analyzing vesicle populations. The method retains the benefits of light microscopy and enables non-destructive analysis of vesicles from susp...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4245123/ https://www.ncbi.nlm.nih.gov/pubmed/25426933 http://dx.doi.org/10.1371/journal.pone.0113405 |
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author | Zupanc, Jernej Drašler, Barbara Boljte, Sabina Kralj-Iglič, Veronika Iglič, Aleš Erdogmus, Deniz Drobne, Damjana |
author_facet | Zupanc, Jernej Drašler, Barbara Boljte, Sabina Kralj-Iglič, Veronika Iglič, Aleš Erdogmus, Deniz Drobne, Damjana |
author_sort | Zupanc, Jernej |
collection | PubMed |
description | We present a method for giant lipid vesicle shape analysis that combines manually guided large-scale video microscopy and computer vision algorithms to enable analyzing vesicle populations. The method retains the benefits of light microscopy and enables non-destructive analysis of vesicles from suspensions containing up to several thousands of lipid vesicles (1–50 µm in diameter). For each sample, image analysis was employed to extract data on vesicle quantity and size distributions of their projected diameters and isoperimetric quotients (measure of contour roundness). This process enables a comparison of samples from the same population over time, or the comparison of a treated population to a control. Although vesicles in suspensions are heterogeneous in sizes and shapes and have distinctively non-homogeneous distribution throughout the suspension, this method allows for the capture and analysis of repeatable vesicle samples that are representative of the population inspected. |
format | Online Article Text |
id | pubmed-4245123 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-42451232014-12-05 Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision Zupanc, Jernej Drašler, Barbara Boljte, Sabina Kralj-Iglič, Veronika Iglič, Aleš Erdogmus, Deniz Drobne, Damjana PLoS One Research Article We present a method for giant lipid vesicle shape analysis that combines manually guided large-scale video microscopy and computer vision algorithms to enable analyzing vesicle populations. The method retains the benefits of light microscopy and enables non-destructive analysis of vesicles from suspensions containing up to several thousands of lipid vesicles (1–50 µm in diameter). For each sample, image analysis was employed to extract data on vesicle quantity and size distributions of their projected diameters and isoperimetric quotients (measure of contour roundness). This process enables a comparison of samples from the same population over time, or the comparison of a treated population to a control. Although vesicles in suspensions are heterogeneous in sizes and shapes and have distinctively non-homogeneous distribution throughout the suspension, this method allows for the capture and analysis of repeatable vesicle samples that are representative of the population inspected. Public Library of Science 2014-11-26 /pmc/articles/PMC4245123/ /pubmed/25426933 http://dx.doi.org/10.1371/journal.pone.0113405 Text en © 2014 Zupanc et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Zupanc, Jernej Drašler, Barbara Boljte, Sabina Kralj-Iglič, Veronika Iglič, Aleš Erdogmus, Deniz Drobne, Damjana Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision |
title | Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision |
title_full | Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision |
title_fullStr | Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision |
title_full_unstemmed | Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision |
title_short | Lipid Vesicle Shape Analysis from Populations Using Light Video Microscopy and Computer Vision |
title_sort | lipid vesicle shape analysis from populations using light video microscopy and computer vision |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4245123/ https://www.ncbi.nlm.nih.gov/pubmed/25426933 http://dx.doi.org/10.1371/journal.pone.0113405 |
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