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Predicted structure model of Bungarotoxin from Bungarus fasciatus snake
Snake venoms are cocktails comprising combinations of different proteins, peptides, enzymes and toxins. Snake toxins have diverse characteristics having different molecular configuration, structure and mode of action. Many toxins derived from snake venom have distinct pharmacological activities. Ven...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4248343/ https://www.ncbi.nlm.nih.gov/pubmed/25489170 http://dx.doi.org/10.6026/97320630010617 |
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author | Roly, Zahida Yesmin Hasan, SM Naimul Ferdaus, KMKB Reza, Md Abu |
author_facet | Roly, Zahida Yesmin Hasan, SM Naimul Ferdaus, KMKB Reza, Md Abu |
author_sort | Roly, Zahida Yesmin |
collection | PubMed |
description | Snake venoms are cocktails comprising combinations of different proteins, peptides, enzymes and toxins. Snake toxins have diverse characteristics having different molecular configuration, structure and mode of action. Many toxins derived from snake venom have distinct pharmacological activities. Venom from Bungarus fasciatus (commonly known as banded krait) is a species of elapid snake found on the South East Asia and Indian sub-continent, mainly contains neurotoxins. Beta bungartotoxin is the major fraction of Bungarus venom and particularly act pre-synaptically by obstructing neurotransmitter release. This toxin in other snake species functionally forms a heterodimer containing two different subunits (A and B). Dimerization of these two chains is a pre-requisite for the proper functionality of this protein. However, B. fasciatus bungartotoxin contains only B chain and their structural orientation in yet to be resolved. Therefore, it is of interest to describe the predicted structure model of the toxin for functional insights. In this work we analyzed the neurotoxic nature, their alignments, secondary and three dimensional structures, functions, active sites and stability with the help of different bioinformatical tools. A comprehensive analysis of the predicted model provides approaching to the functional interpretation of its molecular action. |
format | Online Article Text |
id | pubmed-4248343 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-42483432014-12-08 Predicted structure model of Bungarotoxin from Bungarus fasciatus snake Roly, Zahida Yesmin Hasan, SM Naimul Ferdaus, KMKB Reza, Md Abu Bioinformation Hypothesis Snake venoms are cocktails comprising combinations of different proteins, peptides, enzymes and toxins. Snake toxins have diverse characteristics having different molecular configuration, structure and mode of action. Many toxins derived from snake venom have distinct pharmacological activities. Venom from Bungarus fasciatus (commonly known as banded krait) is a species of elapid snake found on the South East Asia and Indian sub-continent, mainly contains neurotoxins. Beta bungartotoxin is the major fraction of Bungarus venom and particularly act pre-synaptically by obstructing neurotransmitter release. This toxin in other snake species functionally forms a heterodimer containing two different subunits (A and B). Dimerization of these two chains is a pre-requisite for the proper functionality of this protein. However, B. fasciatus bungartotoxin contains only B chain and their structural orientation in yet to be resolved. Therefore, it is of interest to describe the predicted structure model of the toxin for functional insights. In this work we analyzed the neurotoxic nature, their alignments, secondary and three dimensional structures, functions, active sites and stability with the help of different bioinformatical tools. A comprehensive analysis of the predicted model provides approaching to the functional interpretation of its molecular action. Biomedical Informatics 2014-10-30 /pmc/articles/PMC4248343/ /pubmed/25489170 http://dx.doi.org/10.6026/97320630010617 Text en © 2014 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Roly, Zahida Yesmin Hasan, SM Naimul Ferdaus, KMKB Reza, Md Abu Predicted structure model of Bungarotoxin from Bungarus fasciatus snake |
title | Predicted structure model of Bungarotoxin from Bungarus fasciatus snake |
title_full | Predicted structure model of Bungarotoxin from Bungarus fasciatus snake |
title_fullStr | Predicted structure model of Bungarotoxin from Bungarus fasciatus snake |
title_full_unstemmed | Predicted structure model of Bungarotoxin from Bungarus fasciatus snake |
title_short | Predicted structure model of Bungarotoxin from Bungarus fasciatus snake |
title_sort | predicted structure model of bungarotoxin from bungarus fasciatus snake |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4248343/ https://www.ncbi.nlm.nih.gov/pubmed/25489170 http://dx.doi.org/10.6026/97320630010617 |
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