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Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world

As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7 904 isolates, 2 717 isolates were identified as belonging to A...

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Autores principales: Visagie, C.M., Hirooka, Y., Tanney, J.B., Whitfield, E., Mwange, K., Meijer, M., Amend, A.S., Seifert, K.A., Samson, R.A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: CBS Fungal Biodiversity Centre 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255536/
https://www.ncbi.nlm.nih.gov/pubmed/25492981
http://dx.doi.org/10.1016/j.simyco.2014.07.002
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author Visagie, C.M.
Hirooka, Y.
Tanney, J.B.
Whitfield, E.
Mwange, K.
Meijer, M.
Amend, A.S.
Seifert, K.A.
Samson, R.A.
author_facet Visagie, C.M.
Hirooka, Y.
Tanney, J.B.
Whitfield, E.
Mwange, K.
Meijer, M.
Amend, A.S.
Seifert, K.A.
Samson, R.A.
author_sort Visagie, C.M.
collection PubMed
description As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7 904 isolates, 2 717 isolates were identified as belonging to Aspergillus, Penicillium and Talaromyces. The aim of this study was to identify isolates to species level and describe the new species found. Secondly, we wanted to create a reliable reference sequence database to be used for next-generation sequencing projects. Isolates represented 59 Aspergillus species, including eight undescribed species, 49 Penicillium species of which seven were undescribed and 18 Talaromyces species including three described here as new. In total, 568 ITS barcodes were generated, and 391 β-tubulin and 507 calmodulin sequences, which serve as alternative identification markers.
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spelling pubmed-42555362014-12-09 Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world Visagie, C.M. Hirooka, Y. Tanney, J.B. Whitfield, E. Mwange, K. Meijer, M. Amend, A.S. Seifert, K.A. Samson, R.A. Stud Mycol Article As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7 904 isolates, 2 717 isolates were identified as belonging to Aspergillus, Penicillium and Talaromyces. The aim of this study was to identify isolates to species level and describe the new species found. Secondly, we wanted to create a reliable reference sequence database to be used for next-generation sequencing projects. Isolates represented 59 Aspergillus species, including eight undescribed species, 49 Penicillium species of which seven were undescribed and 18 Talaromyces species including three described here as new. In total, 568 ITS barcodes were generated, and 391 β-tubulin and 507 calmodulin sequences, which serve as alternative identification markers. CBS Fungal Biodiversity Centre 2014-06 2014-09-12 /pmc/articles/PMC4255536/ /pubmed/25492981 http://dx.doi.org/10.1016/j.simyco.2014.07.002 Text en Copyright © 2014, CBS-KNAW Fungal Biodiversity Centre. Production and hosting by ELSEVIER B.V. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).
spellingShingle Article
Visagie, C.M.
Hirooka, Y.
Tanney, J.B.
Whitfield, E.
Mwange, K.
Meijer, M.
Amend, A.S.
Seifert, K.A.
Samson, R.A.
Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
title Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
title_full Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
title_fullStr Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
title_full_unstemmed Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
title_short Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
title_sort aspergillus, penicillium and talaromyces isolated from house dust samples collected around the world
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255536/
https://www.ncbi.nlm.nih.gov/pubmed/25492981
http://dx.doi.org/10.1016/j.simyco.2014.07.002
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