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Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world
As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7 904 isolates, 2 717 isolates were identified as belonging to A...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
CBS Fungal Biodiversity Centre
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255536/ https://www.ncbi.nlm.nih.gov/pubmed/25492981 http://dx.doi.org/10.1016/j.simyco.2014.07.002 |
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author | Visagie, C.M. Hirooka, Y. Tanney, J.B. Whitfield, E. Mwange, K. Meijer, M. Amend, A.S. Seifert, K.A. Samson, R.A. |
author_facet | Visagie, C.M. Hirooka, Y. Tanney, J.B. Whitfield, E. Mwange, K. Meijer, M. Amend, A.S. Seifert, K.A. Samson, R.A. |
author_sort | Visagie, C.M. |
collection | PubMed |
description | As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7 904 isolates, 2 717 isolates were identified as belonging to Aspergillus, Penicillium and Talaromyces. The aim of this study was to identify isolates to species level and describe the new species found. Secondly, we wanted to create a reliable reference sequence database to be used for next-generation sequencing projects. Isolates represented 59 Aspergillus species, including eight undescribed species, 49 Penicillium species of which seven were undescribed and 18 Talaromyces species including three described here as new. In total, 568 ITS barcodes were generated, and 391 β-tubulin and 507 calmodulin sequences, which serve as alternative identification markers. |
format | Online Article Text |
id | pubmed-4255536 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | CBS Fungal Biodiversity Centre |
record_format | MEDLINE/PubMed |
spelling | pubmed-42555362014-12-09 Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world Visagie, C.M. Hirooka, Y. Tanney, J.B. Whitfield, E. Mwange, K. Meijer, M. Amend, A.S. Seifert, K.A. Samson, R.A. Stud Mycol Article As part of a worldwide survey of the indoor mycobiota, dust was collected from nine countries. Analyses of dust samples included the culture-dependent dilution-to-extinction method and the culture-independent 454-pyrosequencing. Of the 7 904 isolates, 2 717 isolates were identified as belonging to Aspergillus, Penicillium and Talaromyces. The aim of this study was to identify isolates to species level and describe the new species found. Secondly, we wanted to create a reliable reference sequence database to be used for next-generation sequencing projects. Isolates represented 59 Aspergillus species, including eight undescribed species, 49 Penicillium species of which seven were undescribed and 18 Talaromyces species including three described here as new. In total, 568 ITS barcodes were generated, and 391 β-tubulin and 507 calmodulin sequences, which serve as alternative identification markers. CBS Fungal Biodiversity Centre 2014-06 2014-09-12 /pmc/articles/PMC4255536/ /pubmed/25492981 http://dx.doi.org/10.1016/j.simyco.2014.07.002 Text en Copyright © 2014, CBS-KNAW Fungal Biodiversity Centre. Production and hosting by ELSEVIER B.V. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/). |
spellingShingle | Article Visagie, C.M. Hirooka, Y. Tanney, J.B. Whitfield, E. Mwange, K. Meijer, M. Amend, A.S. Seifert, K.A. Samson, R.A. Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world |
title | Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world |
title_full | Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world |
title_fullStr | Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world |
title_full_unstemmed | Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world |
title_short | Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world |
title_sort | aspergillus, penicillium and talaromyces isolated from house dust samples collected around the world |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255536/ https://www.ncbi.nlm.nih.gov/pubmed/25492981 http://dx.doi.org/10.1016/j.simyco.2014.07.002 |
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