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Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone

Studies of animal behavior are crucial to understanding animal-ecosystem interactions, but require substantial efforts in visual observation or sensor measurement. We investigated how classifying behavioral states of grazing livestock using global positioning data alone depends on the classification...

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Autores principales: Homburger, Hermel, Schneider, Manuel K., Hilfiker, Sandra, Lüscher, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256437/
https://www.ncbi.nlm.nih.gov/pubmed/25474315
http://dx.doi.org/10.1371/journal.pone.0114522
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author Homburger, Hermel
Schneider, Manuel K.
Hilfiker, Sandra
Lüscher, Andreas
author_facet Homburger, Hermel
Schneider, Manuel K.
Hilfiker, Sandra
Lüscher, Andreas
author_sort Homburger, Hermel
collection PubMed
description Studies of animal behavior are crucial to understanding animal-ecosystem interactions, but require substantial efforts in visual observation or sensor measurement. We investigated how classifying behavioral states of grazing livestock using global positioning data alone depends on the classification approach, the preselection of training data, and the number and type of movement metrics. Positions of grazing cows were collected at intervals of 20 seconds in six upland areas in Switzerland along with visual observations of animal behavior for comparison. A total of 87 linear and cumulative distance metrics and 15 turning angle metrics across multiple time steps were used to classify position data into the behavioral states of walking, grazing, and resting. Five random forest classification models, a linear discriminant analysis, a support vector machine, and a state-space model were evaluated. The most accurate classification of the observed behavioral states in an independent validation dataset was 83%, obtained using random forest with all available movement metrics. However, the state-specific accuracy was highly unequal (walking: 36%, grazing: 95%, resting: 58%). Random undersampling led to a prediction accuracy of 77%, with more balanced state-specific accuracies (walking: 68%, grazing: 82%, resting: 68%). The other evaluated machine-learning approaches had lower classification accuracies. The state-space model, based on distance to the preceding position and turning angle, produced a relatively low accuracy of 64%, slightly lower than a random forest model with the same predictor variables. Given the successful classification of behavioral states, our study promotes the more frequent use of global positioning data alone for animal behavior studies under the condition that data is collected at high frequency and complemented by context-specific behavioral observations. Machine-learning algorithms, notably random forest, were found very useful for classification and easy to implement. Moreover, the use of measures across multiple time steps is clearly necessary for a satisfactory classification.
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spelling pubmed-42564372014-12-11 Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone Homburger, Hermel Schneider, Manuel K. Hilfiker, Sandra Lüscher, Andreas PLoS One Research Article Studies of animal behavior are crucial to understanding animal-ecosystem interactions, but require substantial efforts in visual observation or sensor measurement. We investigated how classifying behavioral states of grazing livestock using global positioning data alone depends on the classification approach, the preselection of training data, and the number and type of movement metrics. Positions of grazing cows were collected at intervals of 20 seconds in six upland areas in Switzerland along with visual observations of animal behavior for comparison. A total of 87 linear and cumulative distance metrics and 15 turning angle metrics across multiple time steps were used to classify position data into the behavioral states of walking, grazing, and resting. Five random forest classification models, a linear discriminant analysis, a support vector machine, and a state-space model were evaluated. The most accurate classification of the observed behavioral states in an independent validation dataset was 83%, obtained using random forest with all available movement metrics. However, the state-specific accuracy was highly unequal (walking: 36%, grazing: 95%, resting: 58%). Random undersampling led to a prediction accuracy of 77%, with more balanced state-specific accuracies (walking: 68%, grazing: 82%, resting: 68%). The other evaluated machine-learning approaches had lower classification accuracies. The state-space model, based on distance to the preceding position and turning angle, produced a relatively low accuracy of 64%, slightly lower than a random forest model with the same predictor variables. Given the successful classification of behavioral states, our study promotes the more frequent use of global positioning data alone for animal behavior studies under the condition that data is collected at high frequency and complemented by context-specific behavioral observations. Machine-learning algorithms, notably random forest, were found very useful for classification and easy to implement. Moreover, the use of measures across multiple time steps is clearly necessary for a satisfactory classification. Public Library of Science 2014-12-04 /pmc/articles/PMC4256437/ /pubmed/25474315 http://dx.doi.org/10.1371/journal.pone.0114522 Text en © 2014 Homburger et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Homburger, Hermel
Schneider, Manuel K.
Hilfiker, Sandra
Lüscher, Andreas
Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone
title Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone
title_full Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone
title_fullStr Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone
title_full_unstemmed Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone
title_short Inferring Behavioral States of Grazing Livestock from High-Frequency Position Data Alone
title_sort inferring behavioral states of grazing livestock from high-frequency position data alone
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256437/
https://www.ncbi.nlm.nih.gov/pubmed/25474315
http://dx.doi.org/10.1371/journal.pone.0114522
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