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Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives

N-Protected derivatives of 1-amino­cyclo­hexa­neacetic acid (β(3,3)-Ac(6)c), namely Valeroyl-β(3,3)-Ac(6)c-OH [2-(1-pentanamidocyclohexyl)acetic acid, C(13)H(23)NO(3)], (I), Fmoc-β(3,3)-Ac(6)c-OH [2-(1-{[(9H-fluoren-9-yloxy)carbonyl]amino}cyclohexyl)acetic acid, C(23)H(25)NO(4)], (II), and Pyr-β(3,3...

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Autores principales: Ahmad Wani, Naiem, Gupta, Vivek K., Kant, Rajni, Aravinda, Subrayashastry, Rai, Rajkishor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257263/
https://www.ncbi.nlm.nih.gov/pubmed/25484721
http://dx.doi.org/10.1107/S1600536814020777
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author Ahmad Wani, Naiem
Gupta, Vivek K.
Kant, Rajni
Aravinda, Subrayashastry
Rai, Rajkishor
author_facet Ahmad Wani, Naiem
Gupta, Vivek K.
Kant, Rajni
Aravinda, Subrayashastry
Rai, Rajkishor
author_sort Ahmad Wani, Naiem
collection PubMed
description N-Protected derivatives of 1-amino­cyclo­hexa­neacetic acid (β(3,3)-Ac(6)c), namely Valeroyl-β(3,3)-Ac(6)c-OH [2-(1-pentanamidocyclohexyl)acetic acid, C(13)H(23)NO(3)], (I), Fmoc-β(3,3)-Ac(6)c-OH [2-(1-{[(9H-fluoren-9-yloxy)carbonyl]amino}cyclohexyl)acetic acid, C(23)H(25)NO(4)], (II), and Pyr-β(3,3)-Ac(6)c-OH {2-[1-(pyrazine-2-amido)cyclohexyl]acetic acid, C(13)H(17)N(3)O(3)}, (III), were synthesized and their conformational properties were determined by X-ray diffraction analysis. The backbone torsion angles (ϕ, θ) for β(3,3)-Ac(6)c-OH are restricted to gauche conformations in all the derivatives, with a chair conformation of the cyclo­hexane ring. In the crystal structure of (I), the packing of mol­ecules shows both carb­oxy­lic acid R (2) (2)(8) O—H⋯O and centrosymmetric R (2) (2)(14) N—H⋯O hydrogen-bonding inter­actions, giving rise to chains along the c-axis direction. In (II), centrosymmetric carb­oxy­lic acid R (2) (2)(8) O—H⋯O dimers are extended through N—H⋯O hydrogen bonds and together with inter-ring π–π inter­actions between Fmoc groups [ring centroid distance = 3.786 (2) Å], generate a layered structure lying parallel to (010). In the case of compound (III), carb­oxy­lic acid O—H⋯N(pyrazine) hydrogen bonds give rise to zigzag ribbon structures extending along the c-axis direction.
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spelling pubmed-42572632014-12-05 Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives Ahmad Wani, Naiem Gupta, Vivek K. Kant, Rajni Aravinda, Subrayashastry Rai, Rajkishor Acta Crystallogr Sect E Struct Rep Online Research Communications N-Protected derivatives of 1-amino­cyclo­hexa­neacetic acid (β(3,3)-Ac(6)c), namely Valeroyl-β(3,3)-Ac(6)c-OH [2-(1-pentanamidocyclohexyl)acetic acid, C(13)H(23)NO(3)], (I), Fmoc-β(3,3)-Ac(6)c-OH [2-(1-{[(9H-fluoren-9-yloxy)carbonyl]amino}cyclohexyl)acetic acid, C(23)H(25)NO(4)], (II), and Pyr-β(3,3)-Ac(6)c-OH {2-[1-(pyrazine-2-amido)cyclohexyl]acetic acid, C(13)H(17)N(3)O(3)}, (III), were synthesized and their conformational properties were determined by X-ray diffraction analysis. The backbone torsion angles (ϕ, θ) for β(3,3)-Ac(6)c-OH are restricted to gauche conformations in all the derivatives, with a chair conformation of the cyclo­hexane ring. In the crystal structure of (I), the packing of mol­ecules shows both carb­oxy­lic acid R (2) (2)(8) O—H⋯O and centrosymmetric R (2) (2)(14) N—H⋯O hydrogen-bonding inter­actions, giving rise to chains along the c-axis direction. In (II), centrosymmetric carb­oxy­lic acid R (2) (2)(8) O—H⋯O dimers are extended through N—H⋯O hydrogen bonds and together with inter-ring π–π inter­actions between Fmoc groups [ring centroid distance = 3.786 (2) Å], generate a layered structure lying parallel to (010). In the case of compound (III), carb­oxy­lic acid O—H⋯N(pyrazine) hydrogen bonds give rise to zigzag ribbon structures extending along the c-axis direction. International Union of Crystallography 2014-10-04 /pmc/articles/PMC4257263/ /pubmed/25484721 http://dx.doi.org/10.1107/S1600536814020777 Text en © Ahmad Wani et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Ahmad Wani, Naiem
Gupta, Vivek K.
Kant, Rajni
Aravinda, Subrayashastry
Rai, Rajkishor
Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives
title Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives
title_full Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives
title_fullStr Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives
title_full_unstemmed Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives
title_short Conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)Ac(6)c) in N-protected derivatives
title_sort conformation and crystal structures of 1-amino­cyclo­hexa­neacetic acid (β(3,3)ac(6)c) in n-protected derivatives
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257263/
https://www.ncbi.nlm.nih.gov/pubmed/25484721
http://dx.doi.org/10.1107/S1600536814020777
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