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Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent
The asymmetric unit of the title compound, NH(4) (+)·C(11)H(14)N(6)O(7)P(−)·0.5H(2)O, contains one 3′-azido-3′-deoxythymidine-5′aminocarbonylphosphonate (ACP–AZT) anion, half of an NH(4) (+) cation lying on a twofold rotation axis and in another position, occupied with equal probabilities of 0....
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257306/ https://www.ncbi.nlm.nih.gov/pubmed/25484756 http://dx.doi.org/10.1107/S1600536814022405 |
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author | Jasko, Maxim V. Gurskaya, Galina V. Kukhanova, Marina K. Bushmarinov, Ivan S. |
author_facet | Jasko, Maxim V. Gurskaya, Galina V. Kukhanova, Marina K. Bushmarinov, Ivan S. |
author_sort | Jasko, Maxim V. |
collection | PubMed |
description | The asymmetric unit of the title compound, NH(4) (+)·C(11)H(14)N(6)O(7)P(−)·0.5H(2)O, contains one 3′-azido-3′-deoxythymidine-5′aminocarbonylphosphonate (ACP–AZT) anion, half of an NH(4) (+) cation lying on a twofold rotation axis and in another position, occupied with equal probabilities of 0.5, an NH(4) (+) cation and a water molecule. The amide group of the ACP–AZT anion is disordered (occupancy ratio 0.5:0.5), with one part forming an N—H⋯O (involving C=O⋯H(4)N(+)) hydrogen bond and the other an O—H⋯N (involving C—NH(2)⋯OH(2)) hydrogen bond with the components of the split NH(4) (+)/H(2)O position. The pseudorotation parameters of ACP–AZT set it apart from previously studied AZT and thymidine. In the crystal, the various components are linked by N—H⋯O, O—H⋯O, N—H⋯N, C—H⋯O and C—H⋯N hydrogen bonds, forming a three-dimensional framework. |
format | Online Article Text |
id | pubmed-4257306 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-42573062014-12-05 Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent Jasko, Maxim V. Gurskaya, Galina V. Kukhanova, Marina K. Bushmarinov, Ivan S. Acta Crystallogr Sect E Struct Rep Online Research Communications The asymmetric unit of the title compound, NH(4) (+)·C(11)H(14)N(6)O(7)P(−)·0.5H(2)O, contains one 3′-azido-3′-deoxythymidine-5′aminocarbonylphosphonate (ACP–AZT) anion, half of an NH(4) (+) cation lying on a twofold rotation axis and in another position, occupied with equal probabilities of 0.5, an NH(4) (+) cation and a water molecule. The amide group of the ACP–AZT anion is disordered (occupancy ratio 0.5:0.5), with one part forming an N—H⋯O (involving C=O⋯H(4)N(+)) hydrogen bond and the other an O—H⋯N (involving C—NH(2)⋯OH(2)) hydrogen bond with the components of the split NH(4) (+)/H(2)O position. The pseudorotation parameters of ACP–AZT set it apart from previously studied AZT and thymidine. In the crystal, the various components are linked by N—H⋯O, O—H⋯O, N—H⋯N, C—H⋯O and C—H⋯N hydrogen bonds, forming a three-dimensional framework. International Union of Crystallography 2014-10-24 /pmc/articles/PMC4257306/ /pubmed/25484756 http://dx.doi.org/10.1107/S1600536814022405 Text en © Jasko et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Jasko, Maxim V. Gurskaya, Galina V. Kukhanova, Marina K. Bushmarinov, Ivan S. Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent |
title | Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent |
title_full | Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent |
title_fullStr | Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent |
title_full_unstemmed | Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent |
title_short | Crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-HIV agent |
title_sort | crystal structure of ammonium 3′-azido-3′-deoxythymidine-5′-aminocarbonylphosphonate hemihydrate: an anti-hiv agent |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257306/ https://www.ncbi.nlm.nih.gov/pubmed/25484756 http://dx.doi.org/10.1107/S1600536814022405 |
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