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High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study

Kawasaki disease (KD) is a diffuse and acute small-vessel vasculitis observed in children and has genetic and autoimmune components. We genotyped 112 case-parent trios of European decent (confirmed by AIMS) using the ImmunoChip array and performed association analyses with susceptibility to KD and I...

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Autores principales: Shendre, Aditi, Wiener, Howard W., Zhi, Degui, Vazquez, Ana I, Portman, Michael A., Shrestha, Sadeep
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257866/
https://www.ncbi.nlm.nih.gov/pubmed/25101798
http://dx.doi.org/10.1038/gene.2014.47
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author Shendre, Aditi
Wiener, Howard W.
Zhi, Degui
Vazquez, Ana I
Portman, Michael A.
Shrestha, Sadeep
author_facet Shendre, Aditi
Wiener, Howard W.
Zhi, Degui
Vazquez, Ana I
Portman, Michael A.
Shrestha, Sadeep
author_sort Shendre, Aditi
collection PubMed
description Kawasaki disease (KD) is a diffuse and acute small-vessel vasculitis observed in children and has genetic and autoimmune components. We genotyped 112 case-parent trios of European decent (confirmed by AIMS) using the ImmunoChip array and performed association analyses with susceptibility to KD and IVIG non-response. KD susceptibility was assessed using the transmission disequilibrium test whereas IVIG non-response was evaluated using multivariable logistic regression analysis. We replicated SNPs in three gene regions (FCGR, CD40/CDH22, and HLA-DQB2/HLA-DOB) that have been previously associated with KD and provide support to other findings of several novel SNPs in genes with potential pathway in KD pathogenesis. SNP rs838143 in the 3′ UTR of FUT1 gene (2.7×10(-5)) and rs9847915 in the intergenic region of LOC730109 ∣ BRD7P2 (6.81×10(-7)) were the top hits for KD susceptibility in additive and dominant models, respectively. The top hits for IVIG responsiveness were rs1200332 in the intergenic region of BAZ1A ∣ C14orf19 (1.4×10(-4)) and rs4889606 in the intron of the STX1B gene (6.95×10(-5)) in additive and dominant models, respectively. Our study suggests that genes and biological pathways involved in autoimmune diseases play an important role in the pathogenesis of KD and IVIG response mechanism.
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spelling pubmed-42578662015-06-01 High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study Shendre, Aditi Wiener, Howard W. Zhi, Degui Vazquez, Ana I Portman, Michael A. Shrestha, Sadeep Genes Immun Article Kawasaki disease (KD) is a diffuse and acute small-vessel vasculitis observed in children and has genetic and autoimmune components. We genotyped 112 case-parent trios of European decent (confirmed by AIMS) using the ImmunoChip array and performed association analyses with susceptibility to KD and IVIG non-response. KD susceptibility was assessed using the transmission disequilibrium test whereas IVIG non-response was evaluated using multivariable logistic regression analysis. We replicated SNPs in three gene regions (FCGR, CD40/CDH22, and HLA-DQB2/HLA-DOB) that have been previously associated with KD and provide support to other findings of several novel SNPs in genes with potential pathway in KD pathogenesis. SNP rs838143 in the 3′ UTR of FUT1 gene (2.7×10(-5)) and rs9847915 in the intergenic region of LOC730109 ∣ BRD7P2 (6.81×10(-7)) were the top hits for KD susceptibility in additive and dominant models, respectively. The top hits for IVIG responsiveness were rs1200332 in the intergenic region of BAZ1A ∣ C14orf19 (1.4×10(-4)) and rs4889606 in the intron of the STX1B gene (6.95×10(-5)) in additive and dominant models, respectively. Our study suggests that genes and biological pathways involved in autoimmune diseases play an important role in the pathogenesis of KD and IVIG response mechanism. 2014-08-07 2014-12 /pmc/articles/PMC4257866/ /pubmed/25101798 http://dx.doi.org/10.1038/gene.2014.47 Text en http://www.nature.com/authors/editorial_policies/license.html#terms Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Shendre, Aditi
Wiener, Howard W.
Zhi, Degui
Vazquez, Ana I
Portman, Michael A.
Shrestha, Sadeep
High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study
title High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study
title_full High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study
title_fullStr High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study
title_full_unstemmed High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study
title_short High-density Genotyping of Immune Loci in Kawasaki Disease and IVIG Treatment Response in European-American Case-parent Trio Study
title_sort high-density genotyping of immune loci in kawasaki disease and ivig treatment response in european-american case-parent trio study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4257866/
https://www.ncbi.nlm.nih.gov/pubmed/25101798
http://dx.doi.org/10.1038/gene.2014.47
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