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First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species
BACKGROUND: Western Palearctic tree frogs (Hyla arborea group) represent a strong potential for evolutionary and conservation genetic research, so far underexploited due to limited molecular resources. New microsatellite markers have recently been developed for Hyla arborea, with high cross-species...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4258042/ https://www.ncbi.nlm.nih.gov/pubmed/25430653 http://dx.doi.org/10.1186/1756-0500-7-850 |
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author | Dufresnes, Christophe Brelsford, Alan Perrin, Nicolas |
author_facet | Dufresnes, Christophe Brelsford, Alan Perrin, Nicolas |
author_sort | Dufresnes, Christophe |
collection | PubMed |
description | BACKGROUND: Western Palearctic tree frogs (Hyla arborea group) represent a strong potential for evolutionary and conservation genetic research, so far underexploited due to limited molecular resources. New microsatellite markers have recently been developed for Hyla arborea, with high cross-species utility across the entire circum-Mediterranean radiation. Here we conduct sibship analyses to map available markers for use in future population genetic applications. FINDINGS: We characterized eight linkage groups, including one sex-linked, all showing drastically reduced recombination in males compared to females, as previously documented in this species. Mapping of the new 15 markers to the ~200 My diverged Xenopus tropicalis genome suggests a generally conserved synteny with only one confirmed major chromosome rearrangement. CONCLUSIONS: The new microsatellites are representative of several chromosomes of H. arborea that are likely to be conserved across closely-related species. Our linkage map provides an important resource for genetic research in European Hylids, notably for studies of speciation, genome evolution and conservation. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1756-0500-7-850) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4258042 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-42580422014-12-07 First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species Dufresnes, Christophe Brelsford, Alan Perrin, Nicolas BMC Res Notes Short Report BACKGROUND: Western Palearctic tree frogs (Hyla arborea group) represent a strong potential for evolutionary and conservation genetic research, so far underexploited due to limited molecular resources. New microsatellite markers have recently been developed for Hyla arborea, with high cross-species utility across the entire circum-Mediterranean radiation. Here we conduct sibship analyses to map available markers for use in future population genetic applications. FINDINGS: We characterized eight linkage groups, including one sex-linked, all showing drastically reduced recombination in males compared to females, as previously documented in this species. Mapping of the new 15 markers to the ~200 My diverged Xenopus tropicalis genome suggests a generally conserved synteny with only one confirmed major chromosome rearrangement. CONCLUSIONS: The new microsatellites are representative of several chromosomes of H. arborea that are likely to be conserved across closely-related species. Our linkage map provides an important resource for genetic research in European Hylids, notably for studies of speciation, genome evolution and conservation. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1756-0500-7-850) contains supplementary material, which is available to authorized users. BioMed Central 2014-11-26 /pmc/articles/PMC4258042/ /pubmed/25430653 http://dx.doi.org/10.1186/1756-0500-7-850 Text en © Dufresnes et al.; licensee BioMed Central Ltd. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Report Dufresnes, Christophe Brelsford, Alan Perrin, Nicolas First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species |
title | First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species |
title_full | First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species |
title_fullStr | First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species |
title_full_unstemmed | First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species |
title_short | First-generation linkage map for the European tree frog (Hyla arborea) with utility in congeneric species |
title_sort | first-generation linkage map for the european tree frog (hyla arborea) with utility in congeneric species |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4258042/ https://www.ncbi.nlm.nih.gov/pubmed/25430653 http://dx.doi.org/10.1186/1756-0500-7-850 |
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