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The mitochondrial genome of the land snail Camaena cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae
Abstract. The complete mitochondrial (mt) genome of the snail Camaena cicatricosa (Müller, 1774) has been sequenced and annotated in this study. The entire circular genome is 13,843 bp in size and represents the first camaenid mt genome, with content of 31.9%A, 37.9%T, 13.5%C and 16.7%G. Gene conten...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4258619/ https://www.ncbi.nlm.nih.gov/pubmed/25493046 http://dx.doi.org/10.3897/zookeys.451.8537 |
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author | Wang, Pei Yang, Hai-Fan Zhou, Wei-Chuan Hwang, Chung-Chi Zhang, Wei-Hong Qian, Zhou-Xing |
author_facet | Wang, Pei Yang, Hai-Fan Zhou, Wei-Chuan Hwang, Chung-Chi Zhang, Wei-Hong Qian, Zhou-Xing |
author_sort | Wang, Pei |
collection | PubMed |
description | Abstract. The complete mitochondrial (mt) genome of the snail Camaena cicatricosa (Müller, 1774) has been sequenced and annotated in this study. The entire circular genome is 13,843 bp in size and represents the first camaenid mt genome, with content of 31.9%A, 37.9%T, 13.5%C and 16.7%G. Gene content, codon usage and base organization show similarity to a great extent to the sequenced mt genome from Stylommatophora, whereas, gene order is different from them, especially the positions of tRNA(Cys), tRNA(Phe), COII, tRNA(Asp), tRNA(Gly), tRNA(His) and tRNA(Trp). All protein coding genes use standard initiation codons ATN except for COII with GTG as start signal. Conventional stop codons TAA and TAG have been assigned to all protein coding genes. All tRNA genes possess the typical clover leaf structure, but the TψC arm of tRNA(Asp) and dihydrouridine arm of tRNA(Ser(AGN)) only form a simple loop. Shorter intergenic spacers have been found in this mt genome. Phylogenetic study based on protein coding genes shows close relationship of Camaenidae and Bradybaenidae. The presented phylogeny is consistent with the monophyly of Stylommatophora. |
format | Online Article Text |
id | pubmed-4258619 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-42586192014-12-09 The mitochondrial genome of the land snail Camaena cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae Wang, Pei Yang, Hai-Fan Zhou, Wei-Chuan Hwang, Chung-Chi Zhang, Wei-Hong Qian, Zhou-Xing Zookeys Research Article Abstract. The complete mitochondrial (mt) genome of the snail Camaena cicatricosa (Müller, 1774) has been sequenced and annotated in this study. The entire circular genome is 13,843 bp in size and represents the first camaenid mt genome, with content of 31.9%A, 37.9%T, 13.5%C and 16.7%G. Gene content, codon usage and base organization show similarity to a great extent to the sequenced mt genome from Stylommatophora, whereas, gene order is different from them, especially the positions of tRNA(Cys), tRNA(Phe), COII, tRNA(Asp), tRNA(Gly), tRNA(His) and tRNA(Trp). All protein coding genes use standard initiation codons ATN except for COII with GTG as start signal. Conventional stop codons TAA and TAG have been assigned to all protein coding genes. All tRNA genes possess the typical clover leaf structure, but the TψC arm of tRNA(Asp) and dihydrouridine arm of tRNA(Ser(AGN)) only form a simple loop. Shorter intergenic spacers have been found in this mt genome. Phylogenetic study based on protein coding genes shows close relationship of Camaenidae and Bradybaenidae. The presented phylogeny is consistent with the monophyly of Stylommatophora. Pensoft Publishers 2014-11-03 /pmc/articles/PMC4258619/ /pubmed/25493046 http://dx.doi.org/10.3897/zookeys.451.8537 Text en Pei Wang, Hai-Fan Yang, Wei-Chuan Zhou, Chung-Chi Hwang, Wei-Hong Zhang, Zhou-Xing Qian http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wang, Pei Yang, Hai-Fan Zhou, Wei-Chuan Hwang, Chung-Chi Zhang, Wei-Hong Qian, Zhou-Xing The mitochondrial genome of the land snail Camaena cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae |
title | The mitochondrial genome of the land snail Camaena
cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae |
title_full | The mitochondrial genome of the land snail Camaena
cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae |
title_fullStr | The mitochondrial genome of the land snail Camaena
cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae |
title_full_unstemmed | The mitochondrial genome of the land snail Camaena
cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae |
title_short | The mitochondrial genome of the land snail Camaena
cicatricosa (Müller, 1774) (Stylommatophora, Camaenidae): the first complete sequence in the family Camaenidae |
title_sort | mitochondrial genome of the land snail camaena
cicatricosa (müller, 1774) (stylommatophora, camaenidae): the first complete sequence in the family camaenidae |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4258619/ https://www.ncbi.nlm.nih.gov/pubmed/25493046 http://dx.doi.org/10.3897/zookeys.451.8537 |
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