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The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster
Patellamides are members of the cyanobactin family of ribosomally synthesized and post-translationally modified cyclic peptide natural products, many of which, including some patellamides, are biologically active. A detailed mechanistic understanding of the biosynthetic pathway would enable the cons...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4259220/ https://www.ncbi.nlm.nih.gov/pubmed/25484206 http://dx.doi.org/10.1107/S2053230X1402425X |
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author | Mann, Greg Koehnke, Jesko Bent, Andrew F. Graham, Rachael Houssen, Wael Jaspars, Marcel Schwarz-Linek, Uli Naismith, James H. |
author_facet | Mann, Greg Koehnke, Jesko Bent, Andrew F. Graham, Rachael Houssen, Wael Jaspars, Marcel Schwarz-Linek, Uli Naismith, James H. |
author_sort | Mann, Greg |
collection | PubMed |
description | Patellamides are members of the cyanobactin family of ribosomally synthesized and post-translationally modified cyclic peptide natural products, many of which, including some patellamides, are biologically active. A detailed mechanistic understanding of the biosynthetic pathway would enable the construction of a biotechnological ‘toolkit’ to make novel analogues of patellamides that are not found in nature. All but two of the protein domains involved in patellamide biosynthesis have been characterized. The two domains of unknown function (DUFs) are homologous to each other and are found at the C-termini of the multi-domain proteins PatA and PatG. The domain sequence is found in all cyanobactin-biosynthetic pathways characterized to date, implying a functional role in cyanobactin biosynthesis. Here, the crystal structure of the PatG DUF domain is reported and its binding interactions with plausible substrates are investigated. |
format | Online Article Text |
id | pubmed-4259220 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-42592202014-12-31 The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster Mann, Greg Koehnke, Jesko Bent, Andrew F. Graham, Rachael Houssen, Wael Jaspars, Marcel Schwarz-Linek, Uli Naismith, James H. Acta Crystallogr F Struct Biol Commun Structural Communications Patellamides are members of the cyanobactin family of ribosomally synthesized and post-translationally modified cyclic peptide natural products, many of which, including some patellamides, are biologically active. A detailed mechanistic understanding of the biosynthetic pathway would enable the construction of a biotechnological ‘toolkit’ to make novel analogues of patellamides that are not found in nature. All but two of the protein domains involved in patellamide biosynthesis have been characterized. The two domains of unknown function (DUFs) are homologous to each other and are found at the C-termini of the multi-domain proteins PatA and PatG. The domain sequence is found in all cyanobactin-biosynthetic pathways characterized to date, implying a functional role in cyanobactin biosynthesis. Here, the crystal structure of the PatG DUF domain is reported and its binding interactions with plausible substrates are investigated. International Union of Crystallography 2014-11-14 /pmc/articles/PMC4259220/ /pubmed/25484206 http://dx.doi.org/10.1107/S2053230X1402425X Text en © Mann et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Structural Communications Mann, Greg Koehnke, Jesko Bent, Andrew F. Graham, Rachael Houssen, Wael Jaspars, Marcel Schwarz-Linek, Uli Naismith, James H. The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster |
title | The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster |
title_full | The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster |
title_fullStr | The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster |
title_full_unstemmed | The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster |
title_short | The structure of the cyanobactin domain of unknown function from PatG in the patellamide gene cluster |
title_sort | structure of the cyanobactin domain of unknown function from patg in the patellamide gene cluster |
topic | Structural Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4259220/ https://www.ncbi.nlm.nih.gov/pubmed/25484206 http://dx.doi.org/10.1107/S2053230X1402425X |
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