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Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging

Neurons in the visual system vary widely in the spatiotemporal properties of their receptive fields (RFs), and understanding these variations is key to elucidating how visual information is processed. We present a new approach for mapping RFs based on the filtered back projection (FBP), an algorithm...

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Autores principales: Johnston, Jamie, Ding, Huayu, Seibel, Sofie H, Esposti, Federico, Lagnado, Leon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BlackWell Publishing Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4259530/
https://www.ncbi.nlm.nih.gov/pubmed/25172952
http://dx.doi.org/10.1113/jphysiol.2014.276642
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author Johnston, Jamie
Ding, Huayu
Seibel, Sofie H
Esposti, Federico
Lagnado, Leon
author_facet Johnston, Jamie
Ding, Huayu
Seibel, Sofie H
Esposti, Federico
Lagnado, Leon
author_sort Johnston, Jamie
collection PubMed
description Neurons in the visual system vary widely in the spatiotemporal properties of their receptive fields (RFs), and understanding these variations is key to elucidating how visual information is processed. We present a new approach for mapping RFs based on the filtered back projection (FBP), an algorithm used for tomographic reconstructions. To estimate RFs, a series of bars were flashed across the retina at pseudo-random positions and at a minimum of five orientations. We apply this method to retinal neurons and show that it can accurately recover the spatial RF and impulse response of ganglion cells recorded on a multi-electrode array. We also demonstrate its utility for in vivo imaging by mapping the RFs of an array of bipolar cell synapses expressing a genetically encoded Ca(2+) indicator. We find that FBP offers several advantages over the commonly used spike-triggered average (STA): (i) ON and OFF components of a RF can be separated; (ii) the impulse response can be reconstructed at sample rates of 125 Hz, rather than the refresh rate of a monitor; (iii) FBP reveals the response properties of neurons that are not evident using STA, including those that display orientation selectivity, or fire at low mean spike rates; and (iv) the FBP method is fast, allowing the RFs of all the bipolar cell synaptic terminals in a field of view to be reconstructed in under 4 min. Use of the FBP will benefit investigations of the visual system that employ electrophysiology or optical reporters to measure activity across populations of neurons.
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spelling pubmed-42595302015-01-06 Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging Johnston, Jamie Ding, Huayu Seibel, Sofie H Esposti, Federico Lagnado, Leon J Physiol Techniques for Physiology Neurons in the visual system vary widely in the spatiotemporal properties of their receptive fields (RFs), and understanding these variations is key to elucidating how visual information is processed. We present a new approach for mapping RFs based on the filtered back projection (FBP), an algorithm used for tomographic reconstructions. To estimate RFs, a series of bars were flashed across the retina at pseudo-random positions and at a minimum of five orientations. We apply this method to retinal neurons and show that it can accurately recover the spatial RF and impulse response of ganglion cells recorded on a multi-electrode array. We also demonstrate its utility for in vivo imaging by mapping the RFs of an array of bipolar cell synapses expressing a genetically encoded Ca(2+) indicator. We find that FBP offers several advantages over the commonly used spike-triggered average (STA): (i) ON and OFF components of a RF can be separated; (ii) the impulse response can be reconstructed at sample rates of 125 Hz, rather than the refresh rate of a monitor; (iii) FBP reveals the response properties of neurons that are not evident using STA, including those that display orientation selectivity, or fire at low mean spike rates; and (iv) the FBP method is fast, allowing the RFs of all the bipolar cell synaptic terminals in a field of view to be reconstructed in under 4 min. Use of the FBP will benefit investigations of the visual system that employ electrophysiology or optical reporters to measure activity across populations of neurons. BlackWell Publishing Ltd 2014-11-15 2014-09-29 /pmc/articles/PMC4259530/ /pubmed/25172952 http://dx.doi.org/10.1113/jphysiol.2014.276642 Text en © 2014 The Authors. The Journal of Physiology published by John Wiley & Sons Ltd on behalf of The Physiological Society. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Techniques for Physiology
Johnston, Jamie
Ding, Huayu
Seibel, Sofie H
Esposti, Federico
Lagnado, Leon
Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
title Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
title_full Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
title_fullStr Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
title_full_unstemmed Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
title_short Rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
title_sort rapid mapping of visual receptive fields by filtered back projection: application to multi-neuronal electrophysiology and imaging
topic Techniques for Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4259530/
https://www.ncbi.nlm.nih.gov/pubmed/25172952
http://dx.doi.org/10.1113/jphysiol.2014.276642
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