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PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast

Here, we report on a novel PCR targeting-based strategy called ‘PCR duplication’ that enables targeted duplications of genomic regions in the yeast genome using a simple PCR-based approach. To demonstrate its application we first duplicated the promoter of the FAR1 gene in yeast and simultaneously i...

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Autores principales: Huber, Florian, Meurer, Matthias, Bunina, Daria, Kats, Ilia, Maeder, Céline I., Štefl, Martin, Mongis, Cyril, Knop, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4262419/
https://www.ncbi.nlm.nih.gov/pubmed/25493941
http://dx.doi.org/10.1371/journal.pone.0114590
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author Huber, Florian
Meurer, Matthias
Bunina, Daria
Kats, Ilia
Maeder, Céline I.
Štefl, Martin
Mongis, Cyril
Knop, Michael
author_facet Huber, Florian
Meurer, Matthias
Bunina, Daria
Kats, Ilia
Maeder, Céline I.
Štefl, Martin
Mongis, Cyril
Knop, Michael
author_sort Huber, Florian
collection PubMed
description Here, we report on a novel PCR targeting-based strategy called ‘PCR duplication’ that enables targeted duplications of genomic regions in the yeast genome using a simple PCR-based approach. To demonstrate its application we first duplicated the promoter of the FAR1 gene in yeast and simultaneously inserted a GFP downstream of it. This created a reporter for promoter activity while leaving the FAR1 gene fully intact. In another experiment, we used PCR duplication to increase the dosage of a gene in a discrete manner, from 1× to 2x. Using TUB4, the gene encoding for the yeast γ-tubulin, we validated that this led to corresponding increases in the levels of mRNA and protein. PCR duplication is an easy one-step procedure that can be adapted in different ways to permit rapid, disturbance-free investigation of various genomic regulatory elements without the need for ex vivo cloning.
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spelling pubmed-42624192014-12-15 PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast Huber, Florian Meurer, Matthias Bunina, Daria Kats, Ilia Maeder, Céline I. Štefl, Martin Mongis, Cyril Knop, Michael PLoS One Research Article Here, we report on a novel PCR targeting-based strategy called ‘PCR duplication’ that enables targeted duplications of genomic regions in the yeast genome using a simple PCR-based approach. To demonstrate its application we first duplicated the promoter of the FAR1 gene in yeast and simultaneously inserted a GFP downstream of it. This created a reporter for promoter activity while leaving the FAR1 gene fully intact. In another experiment, we used PCR duplication to increase the dosage of a gene in a discrete manner, from 1× to 2x. Using TUB4, the gene encoding for the yeast γ-tubulin, we validated that this led to corresponding increases in the levels of mRNA and protein. PCR duplication is an easy one-step procedure that can be adapted in different ways to permit rapid, disturbance-free investigation of various genomic regulatory elements without the need for ex vivo cloning. Public Library of Science 2014-12-10 /pmc/articles/PMC4262419/ /pubmed/25493941 http://dx.doi.org/10.1371/journal.pone.0114590 Text en © 2014 Huber et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Huber, Florian
Meurer, Matthias
Bunina, Daria
Kats, Ilia
Maeder, Céline I.
Štefl, Martin
Mongis, Cyril
Knop, Michael
PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast
title PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast
title_full PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast
title_fullStr PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast
title_full_unstemmed PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast
title_short PCR Duplication: A One-Step Cloning-Free Method to Generate Duplicated Chromosomal Loci and Interference-Free Expression Reporters in Yeast
title_sort pcr duplication: a one-step cloning-free method to generate duplicated chromosomal loci and interference-free expression reporters in yeast
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4262419/
https://www.ncbi.nlm.nih.gov/pubmed/25493941
http://dx.doi.org/10.1371/journal.pone.0114590
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