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Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation

Yeasts can form multicellular patterns as they expand on agar plates, a phenotype that requires a functional copy of the FLO11 gene. Although the biochemical and molecular requirements for such patterns have been examined, the mechanisms underlying their formation are not entirely clear. Here we dev...

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Autores principales: Chen, Lin, Noorbakhsh, Javad, Adams, Rhys M., Samaniego-Evans, Joseph, Agollah, Germaine, Nevozhay, Dmitry, Kuzdzal-Fick, Jennie, Mehta, Pankaj, Balázsi, Gábor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4263361/
https://www.ncbi.nlm.nih.gov/pubmed/25504059
http://dx.doi.org/10.1371/journal.pcbi.1003979
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author Chen, Lin
Noorbakhsh, Javad
Adams, Rhys M.
Samaniego-Evans, Joseph
Agollah, Germaine
Nevozhay, Dmitry
Kuzdzal-Fick, Jennie
Mehta, Pankaj
Balázsi, Gábor
author_facet Chen, Lin
Noorbakhsh, Javad
Adams, Rhys M.
Samaniego-Evans, Joseph
Agollah, Germaine
Nevozhay, Dmitry
Kuzdzal-Fick, Jennie
Mehta, Pankaj
Balázsi, Gábor
author_sort Chen, Lin
collection PubMed
description Yeasts can form multicellular patterns as they expand on agar plates, a phenotype that requires a functional copy of the FLO11 gene. Although the biochemical and molecular requirements for such patterns have been examined, the mechanisms underlying their formation are not entirely clear. Here we develop quantitative methods to accurately characterize the size, shape, and surface patterns of yeast colonies for various combinations of agar and sugar concentrations. We combine these measurements with mathematical and physical models and find that FLO11 gene constrains cells to grow near the agar surface, causing the formation of larger and more irregular colonies that undergo hierarchical wrinkling. Head-to-head competition assays on agar plates indicate that two-dimensional constraint on the expansion of FLO11 wild type (FLO11) cells confers a fitness advantage over FLO11 knockout (flo11Δ) cells on the agar surface.
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spelling pubmed-42633612014-12-19 Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation Chen, Lin Noorbakhsh, Javad Adams, Rhys M. Samaniego-Evans, Joseph Agollah, Germaine Nevozhay, Dmitry Kuzdzal-Fick, Jennie Mehta, Pankaj Balázsi, Gábor PLoS Comput Biol Research Article Yeasts can form multicellular patterns as they expand on agar plates, a phenotype that requires a functional copy of the FLO11 gene. Although the biochemical and molecular requirements for such patterns have been examined, the mechanisms underlying their formation are not entirely clear. Here we develop quantitative methods to accurately characterize the size, shape, and surface patterns of yeast colonies for various combinations of agar and sugar concentrations. We combine these measurements with mathematical and physical models and find that FLO11 gene constrains cells to grow near the agar surface, causing the formation of larger and more irregular colonies that undergo hierarchical wrinkling. Head-to-head competition assays on agar plates indicate that two-dimensional constraint on the expansion of FLO11 wild type (FLO11) cells confers a fitness advantage over FLO11 knockout (flo11Δ) cells on the agar surface. Public Library of Science 2014-12-11 /pmc/articles/PMC4263361/ /pubmed/25504059 http://dx.doi.org/10.1371/journal.pcbi.1003979 Text en © 2014 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Chen, Lin
Noorbakhsh, Javad
Adams, Rhys M.
Samaniego-Evans, Joseph
Agollah, Germaine
Nevozhay, Dmitry
Kuzdzal-Fick, Jennie
Mehta, Pankaj
Balázsi, Gábor
Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation
title Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation
title_full Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation
title_fullStr Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation
title_full_unstemmed Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation
title_short Two-Dimensionality of Yeast Colony Expansion Accompanied by Pattern Formation
title_sort two-dimensionality of yeast colony expansion accompanied by pattern formation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4263361/
https://www.ncbi.nlm.nih.gov/pubmed/25504059
http://dx.doi.org/10.1371/journal.pcbi.1003979
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