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Polymorphism of the DNA Base Excision Repair Genes in Keratoconus
Keratoconus (KC) is a degenerative corneal disorder for which the exact pathogenesis is not yet known. Oxidative stress is reported to be associated with this disease. The stress may damage corneal biomolecules, including DNA, and such damage is primarily removed by base excision repair (BER). Varia...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4264133/ https://www.ncbi.nlm.nih.gov/pubmed/25356504 http://dx.doi.org/10.3390/ijms151119682 |
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author | Wojcik, Katarzyna A. Synowiec, Ewelina Sobierajczyk, Katarzyna Izdebska, Justyna Blasiak, Janusz Szaflik, Jerzy Szaflik, Jacek P. |
author_facet | Wojcik, Katarzyna A. Synowiec, Ewelina Sobierajczyk, Katarzyna Izdebska, Justyna Blasiak, Janusz Szaflik, Jerzy Szaflik, Jacek P. |
author_sort | Wojcik, Katarzyna A. |
collection | PubMed |
description | Keratoconus (KC) is a degenerative corneal disorder for which the exact pathogenesis is not yet known. Oxidative stress is reported to be associated with this disease. The stress may damage corneal biomolecules, including DNA, and such damage is primarily removed by base excision repair (BER). Variation in genes encoding BER components may influence the effectiveness of corneal cells to cope with oxidative stress. In the present work we genotyped 5 polymorphisms of 4 BER genes in 284 patients and 353 controls. The A/A genotype of the c.–1370T>A polymorphism of the DNA polymerase γ (POLG) gene was associated with increased occurrence of KC, while the A/T genotype was associated with decreased occurrence of KC. The A/G genotype and the A allele of the c.1196A>G polymorphism of the X-ray repair cross-complementing group 1 (XRCC1) were associated with increased, and the G/G genotype and the G allele, with decreased KC occurrence. Also, the C/T and T as well as C/C genotypes and alleles of the c.580C>T polymorphism of the same gene displayed relationship with KC occurrence. Neither the g.46438521G>C polymorphism of the Nei endonuclease VIII-like 1 (NEIL1) nor the c.2285T>C polymorphism of the poly(ADP-ribose) polymerase-1 (PARP-1) was associated with KC. In conclusion, the variability of the XRCC1 and POLG genes may play a role in KC pathogenesis and determine the risk of this disease. |
format | Online Article Text |
id | pubmed-4264133 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-42641332014-12-12 Polymorphism of the DNA Base Excision Repair Genes in Keratoconus Wojcik, Katarzyna A. Synowiec, Ewelina Sobierajczyk, Katarzyna Izdebska, Justyna Blasiak, Janusz Szaflik, Jerzy Szaflik, Jacek P. Int J Mol Sci Article Keratoconus (KC) is a degenerative corneal disorder for which the exact pathogenesis is not yet known. Oxidative stress is reported to be associated with this disease. The stress may damage corneal biomolecules, including DNA, and such damage is primarily removed by base excision repair (BER). Variation in genes encoding BER components may influence the effectiveness of corneal cells to cope with oxidative stress. In the present work we genotyped 5 polymorphisms of 4 BER genes in 284 patients and 353 controls. The A/A genotype of the c.–1370T>A polymorphism of the DNA polymerase γ (POLG) gene was associated with increased occurrence of KC, while the A/T genotype was associated with decreased occurrence of KC. The A/G genotype and the A allele of the c.1196A>G polymorphism of the X-ray repair cross-complementing group 1 (XRCC1) were associated with increased, and the G/G genotype and the G allele, with decreased KC occurrence. Also, the C/T and T as well as C/C genotypes and alleles of the c.580C>T polymorphism of the same gene displayed relationship with KC occurrence. Neither the g.46438521G>C polymorphism of the Nei endonuclease VIII-like 1 (NEIL1) nor the c.2285T>C polymorphism of the poly(ADP-ribose) polymerase-1 (PARP-1) was associated with KC. In conclusion, the variability of the XRCC1 and POLG genes may play a role in KC pathogenesis and determine the risk of this disease. MDPI 2014-10-29 /pmc/articles/PMC4264133/ /pubmed/25356504 http://dx.doi.org/10.3390/ijms151119682 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wojcik, Katarzyna A. Synowiec, Ewelina Sobierajczyk, Katarzyna Izdebska, Justyna Blasiak, Janusz Szaflik, Jerzy Szaflik, Jacek P. Polymorphism of the DNA Base Excision Repair Genes in Keratoconus |
title | Polymorphism of the DNA Base Excision Repair Genes in Keratoconus |
title_full | Polymorphism of the DNA Base Excision Repair Genes in Keratoconus |
title_fullStr | Polymorphism of the DNA Base Excision Repair Genes in Keratoconus |
title_full_unstemmed | Polymorphism of the DNA Base Excision Repair Genes in Keratoconus |
title_short | Polymorphism of the DNA Base Excision Repair Genes in Keratoconus |
title_sort | polymorphism of the dna base excision repair genes in keratoconus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4264133/ https://www.ncbi.nlm.nih.gov/pubmed/25356504 http://dx.doi.org/10.3390/ijms151119682 |
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