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Presenting simulation results in a nested loop plot

BACKGROUND: Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect...

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Autores principales: Rücker, Gerta, Schwarzer, Guido
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4272778/
https://www.ncbi.nlm.nih.gov/pubmed/25495636
http://dx.doi.org/10.1186/1471-2288-14-129
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author Rücker, Gerta
Schwarzer, Guido
author_facet Rücker, Gerta
Schwarzer, Guido
author_sort Rücker, Gerta
collection PubMed
description BACKGROUND: Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect in binary outcome meta-analyses, where selection bias (e.g., publication bias) was suspected because of apparent funnel plot asymmetry. We varied five simulation parameters: true treatment effect, extent of selection, event proportion in control group, heterogeneity parameter, and number of studies in meta-analysis. In combination, this yielded a total number of 768 scenarios. To present all results using Trellis plots, 12 figures were needed. METHODS: Choosing bias as criterion of interest, we present a ‘nested loop plot’, a diagram type that aims to have all simulation results in one plot. The idea was to bring all scenarios into a lexicographical order and arrange them consecutively on the horizontal axis of a plot, whereas the treatment effect estimate is presented on the vertical axis. RESULTS: The plot illustrates how parameters simultaneously influenced the estimate. It can be combined with a Trellis plot in a so-called hybrid plot. Nested loop plots may also be applied to other criteria such as the variance of estimation. CONCLUSION: The nested loop plot, similar to a time series graph, summarizes all information about the results of a simulation study with respect to a chosen criterion in one picture and provides a suitable alternative or an addition to Trellis plots. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2288-14-129) contains supplementary material, which is available to authorized users.
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spelling pubmed-42727782014-12-22 Presenting simulation results in a nested loop plot Rücker, Gerta Schwarzer, Guido BMC Med Res Methodol Research Article BACKGROUND: Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect in binary outcome meta-analyses, where selection bias (e.g., publication bias) was suspected because of apparent funnel plot asymmetry. We varied five simulation parameters: true treatment effect, extent of selection, event proportion in control group, heterogeneity parameter, and number of studies in meta-analysis. In combination, this yielded a total number of 768 scenarios. To present all results using Trellis plots, 12 figures were needed. METHODS: Choosing bias as criterion of interest, we present a ‘nested loop plot’, a diagram type that aims to have all simulation results in one plot. The idea was to bring all scenarios into a lexicographical order and arrange them consecutively on the horizontal axis of a plot, whereas the treatment effect estimate is presented on the vertical axis. RESULTS: The plot illustrates how parameters simultaneously influenced the estimate. It can be combined with a Trellis plot in a so-called hybrid plot. Nested loop plots may also be applied to other criteria such as the variance of estimation. CONCLUSION: The nested loop plot, similar to a time series graph, summarizes all information about the results of a simulation study with respect to a chosen criterion in one picture and provides a suitable alternative or an addition to Trellis plots. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2288-14-129) contains supplementary material, which is available to authorized users. BioMed Central 2014-12-12 /pmc/articles/PMC4272778/ /pubmed/25495636 http://dx.doi.org/10.1186/1471-2288-14-129 Text en © Rücker and Schwarzer; licensee BioMed Central Ltd. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Rücker, Gerta
Schwarzer, Guido
Presenting simulation results in a nested loop plot
title Presenting simulation results in a nested loop plot
title_full Presenting simulation results in a nested loop plot
title_fullStr Presenting simulation results in a nested loop plot
title_full_unstemmed Presenting simulation results in a nested loop plot
title_short Presenting simulation results in a nested loop plot
title_sort presenting simulation results in a nested loop plot
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4272778/
https://www.ncbi.nlm.nih.gov/pubmed/25495636
http://dx.doi.org/10.1186/1471-2288-14-129
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