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Presenting simulation results in a nested loop plot
BACKGROUND: Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4272778/ https://www.ncbi.nlm.nih.gov/pubmed/25495636 http://dx.doi.org/10.1186/1471-2288-14-129 |
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author | Rücker, Gerta Schwarzer, Guido |
author_facet | Rücker, Gerta Schwarzer, Guido |
author_sort | Rücker, Gerta |
collection | PubMed |
description | BACKGROUND: Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect in binary outcome meta-analyses, where selection bias (e.g., publication bias) was suspected because of apparent funnel plot asymmetry. We varied five simulation parameters: true treatment effect, extent of selection, event proportion in control group, heterogeneity parameter, and number of studies in meta-analysis. In combination, this yielded a total number of 768 scenarios. To present all results using Trellis plots, 12 figures were needed. METHODS: Choosing bias as criterion of interest, we present a ‘nested loop plot’, a diagram type that aims to have all simulation results in one plot. The idea was to bring all scenarios into a lexicographical order and arrange them consecutively on the horizontal axis of a plot, whereas the treatment effect estimate is presented on the vertical axis. RESULTS: The plot illustrates how parameters simultaneously influenced the estimate. It can be combined with a Trellis plot in a so-called hybrid plot. Nested loop plots may also be applied to other criteria such as the variance of estimation. CONCLUSION: The nested loop plot, similar to a time series graph, summarizes all information about the results of a simulation study with respect to a chosen criterion in one picture and provides a suitable alternative or an addition to Trellis plots. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2288-14-129) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4272778 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-42727782014-12-22 Presenting simulation results in a nested loop plot Rücker, Gerta Schwarzer, Guido BMC Med Res Methodol Research Article BACKGROUND: Statisticians investigate new methods in simulations to evaluate their properties for future real data applications. Results are often presented in a number of figures, e.g., Trellis plots. We had conducted a simulation study on six statistical methods for estimating the treatment effect in binary outcome meta-analyses, where selection bias (e.g., publication bias) was suspected because of apparent funnel plot asymmetry. We varied five simulation parameters: true treatment effect, extent of selection, event proportion in control group, heterogeneity parameter, and number of studies in meta-analysis. In combination, this yielded a total number of 768 scenarios. To present all results using Trellis plots, 12 figures were needed. METHODS: Choosing bias as criterion of interest, we present a ‘nested loop plot’, a diagram type that aims to have all simulation results in one plot. The idea was to bring all scenarios into a lexicographical order and arrange them consecutively on the horizontal axis of a plot, whereas the treatment effect estimate is presented on the vertical axis. RESULTS: The plot illustrates how parameters simultaneously influenced the estimate. It can be combined with a Trellis plot in a so-called hybrid plot. Nested loop plots may also be applied to other criteria such as the variance of estimation. CONCLUSION: The nested loop plot, similar to a time series graph, summarizes all information about the results of a simulation study with respect to a chosen criterion in one picture and provides a suitable alternative or an addition to Trellis plots. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2288-14-129) contains supplementary material, which is available to authorized users. BioMed Central 2014-12-12 /pmc/articles/PMC4272778/ /pubmed/25495636 http://dx.doi.org/10.1186/1471-2288-14-129 Text en © Rücker and Schwarzer; licensee BioMed Central Ltd. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Rücker, Gerta Schwarzer, Guido Presenting simulation results in a nested loop plot |
title | Presenting simulation results in a nested loop plot |
title_full | Presenting simulation results in a nested loop plot |
title_fullStr | Presenting simulation results in a nested loop plot |
title_full_unstemmed | Presenting simulation results in a nested loop plot |
title_short | Presenting simulation results in a nested loop plot |
title_sort | presenting simulation results in a nested loop plot |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4272778/ https://www.ncbi.nlm.nih.gov/pubmed/25495636 http://dx.doi.org/10.1186/1471-2288-14-129 |
work_keys_str_mv | AT ruckergerta presentingsimulationresultsinanestedloopplot AT schwarzerguido presentingsimulationresultsinanestedloopplot |