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KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer

BACKGROUND: The optimal laboratory assay for detecting KRAS mutations in different biospecimens from patients with metastatic colorectal cancer (mCRC), and the clinical relevance of these gene alterations is still in question. We analyzed the prognostic–predictive relevance of KRAS status, determine...

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Autores principales: Xu, Jian-Ming, Liu, Xiao-Jing, Ge, Fei-Jiao, Lin, Li, Wang, Yan, Sharma, Manish R, Liu, Ze-Yuan, Tommasi, Stefania, Paradiso, Angelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4272803/
https://www.ncbi.nlm.nih.gov/pubmed/25491325
http://dx.doi.org/10.1186/s13046-014-0104-7
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author Xu, Jian-Ming
Liu, Xiao-Jing
Ge, Fei-Jiao
Lin, Li
Wang, Yan
Sharma, Manish R
Liu, Ze-Yuan
Tommasi, Stefania
Paradiso, Angelo
author_facet Xu, Jian-Ming
Liu, Xiao-Jing
Ge, Fei-Jiao
Lin, Li
Wang, Yan
Sharma, Manish R
Liu, Ze-Yuan
Tommasi, Stefania
Paradiso, Angelo
author_sort Xu, Jian-Ming
collection PubMed
description BACKGROUND: The optimal laboratory assay for detecting KRAS mutations in different biospecimens from patients with metastatic colorectal cancer (mCRC), and the clinical relevance of these gene alterations is still in question. We analyzed the prognostic–predictive relevance of KRAS status, determined in tumor and plasma DNA by two different assays, in a large mono-institutional series of mCRC patients. METHODS: DNA sequencing and peptide-nucleic-acid-mediated-polymerase chain reaction clamping (PNA-PCR) were used to determine KRAS status in 416 tumor and 242 matched plasma DNA samples from mCRC patients who received chemotherapy only. Relationships with outcomes were analyzed with respect to the different assays and tissue types. RESULTS: PNA-PCR was significantly more sensitive in detecting KRAS mutations than sequencing (41% vs. 30%, p < 0.001). KRAS mutations were more frequent in tumor tissue than in plasma (sequencing, 38% vs. 17%, p < 0.001; PNA-PCR, 47% vs. 31%, p < 0.001). Median OS was consistently shorter in KRAS-mutated patients than KRAS wild-type patients, independent from the assay and tissue tested; the largest difference was in plasma samples analyzed by PNA-PCR (KRAS mutated vs. wild-type: 15.7 vs. 19.1 months, p = 0.009). No association was observed between KRAS status and other outcomes. When tumor and plasma results were considered together, median OS in patients categorized as tissue/plasma KRAS negative/negative, tissue/plasma KRAS discordant, and tissue/plasma KRAS positive/positive were 21.0, 16.9 and 15.4 months, respectively (p = 0.008). CONCLUSIONS: KRAS mutation status is of prognostic relevance in patients with mCRC. KRAS mutations in both tumor tissue and plasma are a strong prognostic marker for poor outcomes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13046-014-0104-7) contains supplementary material, which is available to authorized users.
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spelling pubmed-42728032014-12-22 KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer Xu, Jian-Ming Liu, Xiao-Jing Ge, Fei-Jiao Lin, Li Wang, Yan Sharma, Manish R Liu, Ze-Yuan Tommasi, Stefania Paradiso, Angelo J Exp Clin Cancer Res Research BACKGROUND: The optimal laboratory assay for detecting KRAS mutations in different biospecimens from patients with metastatic colorectal cancer (mCRC), and the clinical relevance of these gene alterations is still in question. We analyzed the prognostic–predictive relevance of KRAS status, determined in tumor and plasma DNA by two different assays, in a large mono-institutional series of mCRC patients. METHODS: DNA sequencing and peptide-nucleic-acid-mediated-polymerase chain reaction clamping (PNA-PCR) were used to determine KRAS status in 416 tumor and 242 matched plasma DNA samples from mCRC patients who received chemotherapy only. Relationships with outcomes were analyzed with respect to the different assays and tissue types. RESULTS: PNA-PCR was significantly more sensitive in detecting KRAS mutations than sequencing (41% vs. 30%, p < 0.001). KRAS mutations were more frequent in tumor tissue than in plasma (sequencing, 38% vs. 17%, p < 0.001; PNA-PCR, 47% vs. 31%, p < 0.001). Median OS was consistently shorter in KRAS-mutated patients than KRAS wild-type patients, independent from the assay and tissue tested; the largest difference was in plasma samples analyzed by PNA-PCR (KRAS mutated vs. wild-type: 15.7 vs. 19.1 months, p = 0.009). No association was observed between KRAS status and other outcomes. When tumor and plasma results were considered together, median OS in patients categorized as tissue/plasma KRAS negative/negative, tissue/plasma KRAS discordant, and tissue/plasma KRAS positive/positive were 21.0, 16.9 and 15.4 months, respectively (p = 0.008). CONCLUSIONS: KRAS mutation status is of prognostic relevance in patients with mCRC. KRAS mutations in both tumor tissue and plasma are a strong prognostic marker for poor outcomes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13046-014-0104-7) contains supplementary material, which is available to authorized users. BioMed Central 2014-12-10 /pmc/articles/PMC4272803/ /pubmed/25491325 http://dx.doi.org/10.1186/s13046-014-0104-7 Text en © Xu et al.; licensee BioMed Central Ltd. 2014 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Xu, Jian-Ming
Liu, Xiao-Jing
Ge, Fei-Jiao
Lin, Li
Wang, Yan
Sharma, Manish R
Liu, Ze-Yuan
Tommasi, Stefania
Paradiso, Angelo
KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
title KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
title_full KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
title_fullStr KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
title_full_unstemmed KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
title_short KRAS mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
title_sort kras mutations in tumor tissue and plasma by different assays predict survival of patients with metastatic colorectal cancer
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4272803/
https://www.ncbi.nlm.nih.gov/pubmed/25491325
http://dx.doi.org/10.1186/s13046-014-0104-7
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