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EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom

Plant essential oils are complex mixtures of volatile organic compounds, which play indispensable roles in the environment, for the plant itself, as well as for humans. The potential biological information stored in essential oil composition data can provide an insight into the silent language of pl...

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Autores principales: Kumari, Sangita, Pundhir, Sachin, Priya, Piyush, Jeena, Ganga, Punetha, Ankita, Chawla, Konika, Firdos Jafaree, Zohra, Mondal, Subhasish, Yadav, Gitanjali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4273207/
https://www.ncbi.nlm.nih.gov/pubmed/25534749
http://dx.doi.org/10.1093/database/bau120
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author Kumari, Sangita
Pundhir, Sachin
Priya, Piyush
Jeena, Ganga
Punetha, Ankita
Chawla, Konika
Firdos Jafaree, Zohra
Mondal, Subhasish
Yadav, Gitanjali
author_facet Kumari, Sangita
Pundhir, Sachin
Priya, Piyush
Jeena, Ganga
Punetha, Ankita
Chawla, Konika
Firdos Jafaree, Zohra
Mondal, Subhasish
Yadav, Gitanjali
author_sort Kumari, Sangita
collection PubMed
description Plant essential oils are complex mixtures of volatile organic compounds, which play indispensable roles in the environment, for the plant itself, as well as for humans. The potential biological information stored in essential oil composition data can provide an insight into the silent language of plants, and the roles of these chemical emissions in defense, communication and pollinator attraction. In order to decipher volatile profile patterns from a global perspective, we have developed the ESSential OIL DataBase (EssOilDB), a continually updated, freely available electronic database designed to provide knowledge resource for plant essential oils, that enables one to address a multitude of queries on volatile profiles of native, invasive, normal or stressed plants, across taxonomic clades, geographical locations and several other biotic and abiotic influences. To our knowledge, EssOilDB is the only database in the public domain providing an opportunity for context based scientific research on volatile patterns in plants. EssOilDB presently contains 123 041 essential oil records spanning a century of published reports on volatile profiles, with data from 92 plant taxonomic families, spread across diverse geographical locations all over the globe. We hope that this huge repository of VOCs will facilitate unraveling of the true significance of volatiles in plants, along with creating potential avenues for industrial applications of essential oils. We also illustrate the use of this database in terpene biology and show how EssOilDB can be used to complement data from computational genomics to gain insights into the diversity and variability of terpenoids in the plant kingdom. EssOilDB would serve as a valuable information resource, for students and researchers in plant biology, in the design and discovery of new odor profiles, as well as for entrepreneurs—the potential for generating consumer specific scents being one of the most attractive and interesting topics in the cosmetic industry. Database URL: http://nipgr.res.in/Essoildb/
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spelling pubmed-42732072015-01-23 EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom Kumari, Sangita Pundhir, Sachin Priya, Piyush Jeena, Ganga Punetha, Ankita Chawla, Konika Firdos Jafaree, Zohra Mondal, Subhasish Yadav, Gitanjali Database (Oxford) Original Article Plant essential oils are complex mixtures of volatile organic compounds, which play indispensable roles in the environment, for the plant itself, as well as for humans. The potential biological information stored in essential oil composition data can provide an insight into the silent language of plants, and the roles of these chemical emissions in defense, communication and pollinator attraction. In order to decipher volatile profile patterns from a global perspective, we have developed the ESSential OIL DataBase (EssOilDB), a continually updated, freely available electronic database designed to provide knowledge resource for plant essential oils, that enables one to address a multitude of queries on volatile profiles of native, invasive, normal or stressed plants, across taxonomic clades, geographical locations and several other biotic and abiotic influences. To our knowledge, EssOilDB is the only database in the public domain providing an opportunity for context based scientific research on volatile patterns in plants. EssOilDB presently contains 123 041 essential oil records spanning a century of published reports on volatile profiles, with data from 92 plant taxonomic families, spread across diverse geographical locations all over the globe. We hope that this huge repository of VOCs will facilitate unraveling of the true significance of volatiles in plants, along with creating potential avenues for industrial applications of essential oils. We also illustrate the use of this database in terpene biology and show how EssOilDB can be used to complement data from computational genomics to gain insights into the diversity and variability of terpenoids in the plant kingdom. EssOilDB would serve as a valuable information resource, for students and researchers in plant biology, in the design and discovery of new odor profiles, as well as for entrepreneurs—the potential for generating consumer specific scents being one of the most attractive and interesting topics in the cosmetic industry. Database URL: http://nipgr.res.in/Essoildb/ Oxford University Press 2014-12-20 /pmc/articles/PMC4273207/ /pubmed/25534749 http://dx.doi.org/10.1093/database/bau120 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Kumari, Sangita
Pundhir, Sachin
Priya, Piyush
Jeena, Ganga
Punetha, Ankita
Chawla, Konika
Firdos Jafaree, Zohra
Mondal, Subhasish
Yadav, Gitanjali
EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom
title EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom
title_full EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom
title_fullStr EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom
title_full_unstemmed EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom
title_short EssOilDB: a database of essential oils reflecting terpene composition and variability in the plant kingdom
title_sort essoildb: a database of essential oils reflecting terpene composition and variability in the plant kingdom
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4273207/
https://www.ncbi.nlm.nih.gov/pubmed/25534749
http://dx.doi.org/10.1093/database/bau120
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