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Spatial analyses of wildlife contact networks
Datasets from which wildlife contact networks of epidemiological importance can be inferred are becoming increasingly common. A largely unexplored facet of these data is finding evidence of spatial constraints on who has contact with whom, despite theoretical epidemiologists having long realized spa...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4277090/ https://www.ncbi.nlm.nih.gov/pubmed/25411407 http://dx.doi.org/10.1098/rsif.2014.1004 |
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author | Davis, Stephen Abbasi, Babak Shah, Shrupa Telfer, Sandra Begon, Mike |
author_facet | Davis, Stephen Abbasi, Babak Shah, Shrupa Telfer, Sandra Begon, Mike |
author_sort | Davis, Stephen |
collection | PubMed |
description | Datasets from which wildlife contact networks of epidemiological importance can be inferred are becoming increasingly common. A largely unexplored facet of these data is finding evidence of spatial constraints on who has contact with whom, despite theoretical epidemiologists having long realized spatial constraints can play a critical role in infectious disease dynamics. A graph dissimilarity measure is proposed to quantify how close an observed contact network is to being purely spatial whereby its edges are completely determined by the spatial arrangement of its nodes. Statistical techniques are also used to fit a series of mechanistic models for contact rates between individuals to the binary edge data representing presence or absence of observed contact. These are the basis for a second measure that quantifies the extent to which contacts are being mediated by distance. We apply these methods to a set of 128 contact networks of field voles (Microtus agrestis) inferred from mark–recapture data collected over 7 years and from four sites. Large fluctuations in vole abundance allow us to demonstrate that the networks become increasingly similar to spatial proximity graphs as vole density increases. The average number of contacts, [Image: see text], was (i) positively correlated with vole density across the range of observed densities and (ii) for two of the four sites a saturating function of density. The implications for pathogen persistence in wildlife may be that persistence is relatively unaffected by fluctuations in host density because at low density [Image: see text] is low but hosts move more freely, and at high density [Image: see text] is high but transmission is hampered by local build-up of infected or recovered animals. |
format | Online Article Text |
id | pubmed-4277090 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-42770902015-01-06 Spatial analyses of wildlife contact networks Davis, Stephen Abbasi, Babak Shah, Shrupa Telfer, Sandra Begon, Mike J R Soc Interface Research Articles Datasets from which wildlife contact networks of epidemiological importance can be inferred are becoming increasingly common. A largely unexplored facet of these data is finding evidence of spatial constraints on who has contact with whom, despite theoretical epidemiologists having long realized spatial constraints can play a critical role in infectious disease dynamics. A graph dissimilarity measure is proposed to quantify how close an observed contact network is to being purely spatial whereby its edges are completely determined by the spatial arrangement of its nodes. Statistical techniques are also used to fit a series of mechanistic models for contact rates between individuals to the binary edge data representing presence or absence of observed contact. These are the basis for a second measure that quantifies the extent to which contacts are being mediated by distance. We apply these methods to a set of 128 contact networks of field voles (Microtus agrestis) inferred from mark–recapture data collected over 7 years and from four sites. Large fluctuations in vole abundance allow us to demonstrate that the networks become increasingly similar to spatial proximity graphs as vole density increases. The average number of contacts, [Image: see text], was (i) positively correlated with vole density across the range of observed densities and (ii) for two of the four sites a saturating function of density. The implications for pathogen persistence in wildlife may be that persistence is relatively unaffected by fluctuations in host density because at low density [Image: see text] is low but hosts move more freely, and at high density [Image: see text] is high but transmission is hampered by local build-up of infected or recovered animals. The Royal Society 2015-01-06 /pmc/articles/PMC4277090/ /pubmed/25411407 http://dx.doi.org/10.1098/rsif.2014.1004 Text en http://creativecommons.org/licenses/by/4.0/ © 2014 The Authors. Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Research Articles Davis, Stephen Abbasi, Babak Shah, Shrupa Telfer, Sandra Begon, Mike Spatial analyses of wildlife contact networks |
title | Spatial analyses of wildlife contact networks |
title_full | Spatial analyses of wildlife contact networks |
title_fullStr | Spatial analyses of wildlife contact networks |
title_full_unstemmed | Spatial analyses of wildlife contact networks |
title_short | Spatial analyses of wildlife contact networks |
title_sort | spatial analyses of wildlife contact networks |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4277090/ https://www.ncbi.nlm.nih.gov/pubmed/25411407 http://dx.doi.org/10.1098/rsif.2014.1004 |
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