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Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant
Visible/near-infrared (Vis/NIR) hyperspectral imaging was employed to determine the spatial distribution of total nitrogen in pepper plant. Hyperspectral images of samples (leaves, stems, and roots of pepper plants) were acquired and their total nitrogen contents (TNCs) were measured using Dumas com...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4280196/ https://www.ncbi.nlm.nih.gov/pubmed/25549353 http://dx.doi.org/10.1371/journal.pone.0116205 |
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author | Yu, Ke-Qiang Zhao, Yan-Ru Li, Xiao-Li Shao, Yong-Ni Liu, Fei He, Yong |
author_facet | Yu, Ke-Qiang Zhao, Yan-Ru Li, Xiao-Li Shao, Yong-Ni Liu, Fei He, Yong |
author_sort | Yu, Ke-Qiang |
collection | PubMed |
description | Visible/near-infrared (Vis/NIR) hyperspectral imaging was employed to determine the spatial distribution of total nitrogen in pepper plant. Hyperspectral images of samples (leaves, stems, and roots of pepper plants) were acquired and their total nitrogen contents (TNCs) were measured using Dumas combustion method. Mean spectra of all samples were extracted from regions of interest (ROIs) in hyperspectral images. Random frog (RF) algorithm was implemented to select important wavelengths which carried effective information for predicting the TNCs in leaf, stem, root, and whole-plant (leaf-stem-root), respectively. Based on full spectra and the selected important wavelengths, the quantitative relationships between spectral data and the corresponding TNCs in organs (leaf, stem, and root) and whole-plant (leaf-stem-root) were separately developed using partial least-squares regression (PLSR). As a result, the PLSR model built by the important wavelengths for predicting TNCs in whole-plant (leaf-stem-root) offered a promising result of correlation coefficient (R) for prediction (R(P) = 0.876) and root mean square error (RMSE) for prediction (RMSEP = 0.426%). Finally, the TNC of each pixel within ROI of the sample was estimated to generate the spatial distribution map of TNC in pepper plant. The achievements of the research indicated that hyperspectral imaging is promising and presents a powerful potential to determine nitrogen contents spatial distribution in pepper plant. |
format | Online Article Text |
id | pubmed-4280196 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-42801962015-01-07 Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant Yu, Ke-Qiang Zhao, Yan-Ru Li, Xiao-Li Shao, Yong-Ni Liu, Fei He, Yong PLoS One Research Article Visible/near-infrared (Vis/NIR) hyperspectral imaging was employed to determine the spatial distribution of total nitrogen in pepper plant. Hyperspectral images of samples (leaves, stems, and roots of pepper plants) were acquired and their total nitrogen contents (TNCs) were measured using Dumas combustion method. Mean spectra of all samples were extracted from regions of interest (ROIs) in hyperspectral images. Random frog (RF) algorithm was implemented to select important wavelengths which carried effective information for predicting the TNCs in leaf, stem, root, and whole-plant (leaf-stem-root), respectively. Based on full spectra and the selected important wavelengths, the quantitative relationships between spectral data and the corresponding TNCs in organs (leaf, stem, and root) and whole-plant (leaf-stem-root) were separately developed using partial least-squares regression (PLSR). As a result, the PLSR model built by the important wavelengths for predicting TNCs in whole-plant (leaf-stem-root) offered a promising result of correlation coefficient (R) for prediction (R(P) = 0.876) and root mean square error (RMSE) for prediction (RMSEP = 0.426%). Finally, the TNC of each pixel within ROI of the sample was estimated to generate the spatial distribution map of TNC in pepper plant. The achievements of the research indicated that hyperspectral imaging is promising and presents a powerful potential to determine nitrogen contents spatial distribution in pepper plant. Public Library of Science 2014-12-30 /pmc/articles/PMC4280196/ /pubmed/25549353 http://dx.doi.org/10.1371/journal.pone.0116205 Text en © 2014 Yu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Yu, Ke-Qiang Zhao, Yan-Ru Li, Xiao-Li Shao, Yong-Ni Liu, Fei He, Yong Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant |
title | Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant |
title_full | Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant |
title_fullStr | Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant |
title_full_unstemmed | Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant |
title_short | Hyperspectral Imaging for Mapping of Total Nitrogen Spatial Distribution in Pepper Plant |
title_sort | hyperspectral imaging for mapping of total nitrogen spatial distribution in pepper plant |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4280196/ https://www.ncbi.nlm.nih.gov/pubmed/25549353 http://dx.doi.org/10.1371/journal.pone.0116205 |
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