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Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3
BACKGROUND: Bacteriophage vB_YenP_AP5 is a lytic bacteriophage capable of infecting Yersinia enterocolitica strains of serotype O:3, an epidemiologically significant serotype within this bacterial species that causes yersiniosis in humans. This work describes the complete genome sequence of this pha...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4283147/ https://www.ncbi.nlm.nih.gov/pubmed/25347934 http://dx.doi.org/10.1186/1743-422X-11-188 |
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author | Leon-Velarde, Carlos G Kropinski, Andrew M Chen, Shu Abbasifar, Arash Griffiths, Mansel W Odumeru, Joseph A |
author_facet | Leon-Velarde, Carlos G Kropinski, Andrew M Chen, Shu Abbasifar, Arash Griffiths, Mansel W Odumeru, Joseph A |
author_sort | Leon-Velarde, Carlos G |
collection | PubMed |
description | BACKGROUND: Bacteriophage vB_YenP_AP5 is a lytic bacteriophage capable of infecting Yersinia enterocolitica strains of serotype O:3, an epidemiologically significant serotype within this bacterial species that causes yersiniosis in humans. This work describes the complete genome sequence of this phage. RESULTS: The genome consists of linear double-stranded DNA of 38,646 bp, with direct terminal repeats of 235 bp in length, and a GC content of 50.7%. There are 45 open reading frames which occupy 89.9% of the genome. Most of the proteins encoded by this virus exhibit sequence similarity to Yersinia phage φYeO3-12 and Salmonella phage φSG-JL2 proteins. CONCLUSIONS: Genomic and morphological analyses place the bacteriophage vB_YenP_AP5 in the T7likevirus genus of the subfamily Autographivirinae within the family Podoviridae. |
format | Online Article Text |
id | pubmed-4283147 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-42831472015-01-06 Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 Leon-Velarde, Carlos G Kropinski, Andrew M Chen, Shu Abbasifar, Arash Griffiths, Mansel W Odumeru, Joseph A Virol J Research BACKGROUND: Bacteriophage vB_YenP_AP5 is a lytic bacteriophage capable of infecting Yersinia enterocolitica strains of serotype O:3, an epidemiologically significant serotype within this bacterial species that causes yersiniosis in humans. This work describes the complete genome sequence of this phage. RESULTS: The genome consists of linear double-stranded DNA of 38,646 bp, with direct terminal repeats of 235 bp in length, and a GC content of 50.7%. There are 45 open reading frames which occupy 89.9% of the genome. Most of the proteins encoded by this virus exhibit sequence similarity to Yersinia phage φYeO3-12 and Salmonella phage φSG-JL2 proteins. CONCLUSIONS: Genomic and morphological analyses place the bacteriophage vB_YenP_AP5 in the T7likevirus genus of the subfamily Autographivirinae within the family Podoviridae. BioMed Central 2014-10-28 /pmc/articles/PMC4283147/ /pubmed/25347934 http://dx.doi.org/10.1186/1743-422X-11-188 Text en © Leon-Velarde et al.; licensee BioMed Central Ltd. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Leon-Velarde, Carlos G Kropinski, Andrew M Chen, Shu Abbasifar, Arash Griffiths, Mansel W Odumeru, Joseph A Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 |
title | Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 |
title_full | Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 |
title_fullStr | Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 |
title_full_unstemmed | Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 |
title_short | Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocolitica of serotype O:3 |
title_sort | complete genome sequence of bacteriophage vb_yenp_ap5 which infects yersinia enterocolitica of serotype o:3 |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4283147/ https://www.ncbi.nlm.nih.gov/pubmed/25347934 http://dx.doi.org/10.1186/1743-422X-11-188 |
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