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Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability

The “RNA world” and the “Lipid world” theories for the origin of cellular life are often considered incompatible due to the differences in the environmental conditions at which they can emerge. One obstacle resides in the conflicting requirements for divalent metal ions, in particular Mg(2+), with r...

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Autores principales: Anella, Fabrizio, Danelon, Christophe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4284475/
https://www.ncbi.nlm.nih.gov/pubmed/25513761
http://dx.doi.org/10.3390/life4040929
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author Anella, Fabrizio
Danelon, Christophe
author_facet Anella, Fabrizio
Danelon, Christophe
author_sort Anella, Fabrizio
collection PubMed
description The “RNA world” and the “Lipid world” theories for the origin of cellular life are often considered incompatible due to the differences in the environmental conditions at which they can emerge. One obstacle resides in the conflicting requirements for divalent metal ions, in particular Mg(2+), with respect to optimal ribozyme activity, fatty acid vesicle stability and protection against RNA strand cleavage. Here, we report on the activity of a short L1 ligase ribozyme in the presence of myristoleic acid (MA) vesicles at varying concentrations of Mg(2+). The ligation rate is significantly lower at low-Mg(2+) conditions. However, the loss of activity is overcompensated by the increased stability of RNA leading to a larger amount of intact ligated substrate after long reaction periods. Combining RNA ligation assays with fatty acid vesicles we found that MA vesicles made of 5 mM amphiphile are stable and do not impair ligase ribozyme activity in the presence of approximately 2 mM Mg(2+). These results provide a scenario in which catalytic RNA and primordial membrane assembly can coexist in the same environment.
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spelling pubmed-42844752015-01-21 Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability Anella, Fabrizio Danelon, Christophe Life (Basel) Article The “RNA world” and the “Lipid world” theories for the origin of cellular life are often considered incompatible due to the differences in the environmental conditions at which they can emerge. One obstacle resides in the conflicting requirements for divalent metal ions, in particular Mg(2+), with respect to optimal ribozyme activity, fatty acid vesicle stability and protection against RNA strand cleavage. Here, we report on the activity of a short L1 ligase ribozyme in the presence of myristoleic acid (MA) vesicles at varying concentrations of Mg(2+). The ligation rate is significantly lower at low-Mg(2+) conditions. However, the loss of activity is overcompensated by the increased stability of RNA leading to a larger amount of intact ligated substrate after long reaction periods. Combining RNA ligation assays with fatty acid vesicles we found that MA vesicles made of 5 mM amphiphile are stable and do not impair ligase ribozyme activity in the presence of approximately 2 mM Mg(2+). These results provide a scenario in which catalytic RNA and primordial membrane assembly can coexist in the same environment. MDPI 2014-12-11 /pmc/articles/PMC4284475/ /pubmed/25513761 http://dx.doi.org/10.3390/life4040929 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Anella, Fabrizio
Danelon, Christophe
Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability
title Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability
title_full Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability
title_fullStr Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability
title_full_unstemmed Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability
title_short Reconciling Ligase Ribozyme Activity with Fatty Acid Vesicle Stability
title_sort reconciling ligase ribozyme activity with fatty acid vesicle stability
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4284475/
https://www.ncbi.nlm.nih.gov/pubmed/25513761
http://dx.doi.org/10.3390/life4040929
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