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A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus
The degradation of plant biomass by saprophytes is an ecologically important part of the global carbon cycle, which has also inspired a vast diversity of industrial enzyme applications. The xyloglucans (XyGs) constitute a family of ubiquitous and abundant plant cell wall polysaccharides, yet the enz...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BlackWell Publishing Ltd
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4285296/ https://www.ncbi.nlm.nih.gov/pubmed/25171165 http://dx.doi.org/10.1111/mmi.12776 |
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author | Larsbrink, Johan Thompson, Andrew J Lundqvist, Magnus Gardner, Jeffrey G Davies, Gideon J Brumer, Harry |
author_facet | Larsbrink, Johan Thompson, Andrew J Lundqvist, Magnus Gardner, Jeffrey G Davies, Gideon J Brumer, Harry |
author_sort | Larsbrink, Johan |
collection | PubMed |
description | The degradation of plant biomass by saprophytes is an ecologically important part of the global carbon cycle, which has also inspired a vast diversity of industrial enzyme applications. The xyloglucans (XyGs) constitute a family of ubiquitous and abundant plant cell wall polysaccharides, yet the enzymology of XyG saccharification is poorly studied. Here, we present the identification and molecular characterization of a complex genetic locus that is required for xyloglucan utilization by the model saprophyte Cellvibrio japonicus. In harness, transcriptomics, reverse genetics, enzyme kinetics, and structural biology indicate that the encoded cohort of an α-xylosidase, a β-galactosidase, and an α-l-fucosidase is specifically adapted for efficient, concerted saccharification of dicot (fucogalacto)xyloglucan oligosaccharides following import into the periplasm via an associated TonB-dependent receptor. The data support a biological model of xyloglucan degradation by C. japonicus with striking similarities – and notable differences – to the complex polysaccharide utilization loci of the Bacteroidetes. |
format | Online Article Text |
id | pubmed-4285296 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BlackWell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-42852962015-01-26 A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus Larsbrink, Johan Thompson, Andrew J Lundqvist, Magnus Gardner, Jeffrey G Davies, Gideon J Brumer, Harry Mol Microbiol Research Articles The degradation of plant biomass by saprophytes is an ecologically important part of the global carbon cycle, which has also inspired a vast diversity of industrial enzyme applications. The xyloglucans (XyGs) constitute a family of ubiquitous and abundant plant cell wall polysaccharides, yet the enzymology of XyG saccharification is poorly studied. Here, we present the identification and molecular characterization of a complex genetic locus that is required for xyloglucan utilization by the model saprophyte Cellvibrio japonicus. In harness, transcriptomics, reverse genetics, enzyme kinetics, and structural biology indicate that the encoded cohort of an α-xylosidase, a β-galactosidase, and an α-l-fucosidase is specifically adapted for efficient, concerted saccharification of dicot (fucogalacto)xyloglucan oligosaccharides following import into the periplasm via an associated TonB-dependent receptor. The data support a biological model of xyloglucan degradation by C. japonicus with striking similarities – and notable differences – to the complex polysaccharide utilization loci of the Bacteroidetes. BlackWell Publishing Ltd 2014-10 2014-09-17 /pmc/articles/PMC4285296/ /pubmed/25171165 http://dx.doi.org/10.1111/mmi.12776 Text en © 2014 The Authors. Molecular Microbiology published by John Wiley & Sons Ltd. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Larsbrink, Johan Thompson, Andrew J Lundqvist, Magnus Gardner, Jeffrey G Davies, Gideon J Brumer, Harry A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus |
title | A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus |
title_full | A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus |
title_fullStr | A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus |
title_full_unstemmed | A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus |
title_short | A complex gene locus enables xyloglucan utilization in the model saprophyte Cellvibrio japonicus |
title_sort | complex gene locus enables xyloglucan utilization in the model saprophyte cellvibrio japonicus |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4285296/ https://www.ncbi.nlm.nih.gov/pubmed/25171165 http://dx.doi.org/10.1111/mmi.12776 |
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