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DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India

Recent studies from East Asia and Canadian National Collection of Insects have established the utility of DNA barcoding technique in identification of true bugs. The present study is an expansion of the database by adding mitochondrial cytochrome c oxidase I (mtCOI) sequences from forty three specie...

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Detalles Bibliográficos
Autores principales: Tembe, Sanket, Shouche, Yogesh, Ghate, H.V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4287870/
https://www.ncbi.nlm.nih.gov/pubmed/25606457
http://dx.doi.org/10.1016/j.mgene.2014.09.006
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author Tembe, Sanket
Shouche, Yogesh
Ghate, H.V.
author_facet Tembe, Sanket
Shouche, Yogesh
Ghate, H.V.
author_sort Tembe, Sanket
collection PubMed
description Recent studies from East Asia and Canadian National Collection of Insects have established the utility of DNA barcoding technique in identification of true bugs. The present study is an expansion of the database by adding mitochondrial cytochrome c oxidase I (mtCOI) sequences from forty three species of indigenous true bugs of India. mtCOI gene analysis of infraorder Pentatomomorpha covering a total of seventy three species that belong to five superfamilies; Pentatomoidea, Coreoidea, Pyrrhocoroidea, Lygaeoidea and Aradoidea revealed more than 3% interspecific distances in all the taxa studied except for two cases which showed barcode sharing. Less than 2% intra-specific divergence was observed in 97% of the taxa analysed and the average interspecies genetic distance was about 29 times higher than the average intraspecies genetic divergence. Distinct sequence divergence pattern at generic level and NJ clustering analysis suggests that COI barcode is an excellent molecular marker for species level identification of unknown taxa; however it may not be useful for resolving deep levels of divergence. Species identification even at nymphal stage could be achieved confirming the efficacy of this technique.
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spelling pubmed-42878702015-01-20 DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India Tembe, Sanket Shouche, Yogesh Ghate, H.V. Meta Gene Article Recent studies from East Asia and Canadian National Collection of Insects have established the utility of DNA barcoding technique in identification of true bugs. The present study is an expansion of the database by adding mitochondrial cytochrome c oxidase I (mtCOI) sequences from forty three species of indigenous true bugs of India. mtCOI gene analysis of infraorder Pentatomomorpha covering a total of seventy three species that belong to five superfamilies; Pentatomoidea, Coreoidea, Pyrrhocoroidea, Lygaeoidea and Aradoidea revealed more than 3% interspecific distances in all the taxa studied except for two cases which showed barcode sharing. Less than 2% intra-specific divergence was observed in 97% of the taxa analysed and the average interspecies genetic distance was about 29 times higher than the average intraspecies genetic divergence. Distinct sequence divergence pattern at generic level and NJ clustering analysis suggests that COI barcode is an excellent molecular marker for species level identification of unknown taxa; however it may not be useful for resolving deep levels of divergence. Species identification even at nymphal stage could be achieved confirming the efficacy of this technique. Elsevier 2014-10-10 /pmc/articles/PMC4287870/ /pubmed/25606457 http://dx.doi.org/10.1016/j.mgene.2014.09.006 Text en © 2014 The Authors http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).
spellingShingle Article
Tembe, Sanket
Shouche, Yogesh
Ghate, H.V.
DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
title DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
title_full DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
title_fullStr DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
title_full_unstemmed DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
title_short DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
title_sort dna barcoding of pentatomomorpha bugs (hemiptera: heteroptera) from western ghats of india
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4287870/
https://www.ncbi.nlm.nih.gov/pubmed/25606457
http://dx.doi.org/10.1016/j.mgene.2014.09.006
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