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The family of LSU-like proteins
The plant response to sulfur deficiency includes extensive metabolic changes which can be monitored at various levels (transcriptome, proteome, metabolome) even before the first visible symptoms of sulfur starvation appear. Four members of the plant-specific LSU (response to Low SUlfur) gene family...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4292543/ https://www.ncbi.nlm.nih.gov/pubmed/25628631 http://dx.doi.org/10.3389/fpls.2014.00774 |
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author | Sirko, Agnieszka Wawrzyńska, Anna Rodríguez, Milagros Collados Sęktas, Pawel |
author_facet | Sirko, Agnieszka Wawrzyńska, Anna Rodríguez, Milagros Collados Sęktas, Pawel |
author_sort | Sirko, Agnieszka |
collection | PubMed |
description | The plant response to sulfur deficiency includes extensive metabolic changes which can be monitored at various levels (transcriptome, proteome, metabolome) even before the first visible symptoms of sulfur starvation appear. Four members of the plant-specific LSU (response to Low SUlfur) gene family occur in Arabidopsis thaliana (LSU1-4). Variable numbers of LSU genes occur in other plant species but they were studied only in Arabidopsis and tobacco. Three out of four of the Arabidopsis LSU genes are induced by sulfur deficiency. The LSU-like genes in tobacco were characterized as UP9 (UPregulated by sulfur deficit 9). LSU-like proteins do not have characteristic domains that provide clues to their function. Despite having only moderate primary sequence conservation they share several common features including small size, a coiled–coil secondary structure and short conserved motifs in specific positions. Although the precise function of LSU-like proteins is still unknown there is some evidence that members of the LSU family are involved in plant responses to environmental challenges, such as sulfur deficiency, and possibly in plant immune responses. Various bioinformatic approaches have identified LSU-like proteins as important hubs for integration of signals from environmental stimuli. In this paper we review a variety of published data on LSU gene expression, the properties of lsu mutants and features of LSU-like proteins in the hope of shedding some light on their possible role in plant metabolism. |
format | Online Article Text |
id | pubmed-4292543 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-42925432015-01-27 The family of LSU-like proteins Sirko, Agnieszka Wawrzyńska, Anna Rodríguez, Milagros Collados Sęktas, Pawel Front Plant Sci Plant Science The plant response to sulfur deficiency includes extensive metabolic changes which can be monitored at various levels (transcriptome, proteome, metabolome) even before the first visible symptoms of sulfur starvation appear. Four members of the plant-specific LSU (response to Low SUlfur) gene family occur in Arabidopsis thaliana (LSU1-4). Variable numbers of LSU genes occur in other plant species but they were studied only in Arabidopsis and tobacco. Three out of four of the Arabidopsis LSU genes are induced by sulfur deficiency. The LSU-like genes in tobacco were characterized as UP9 (UPregulated by sulfur deficit 9). LSU-like proteins do not have characteristic domains that provide clues to their function. Despite having only moderate primary sequence conservation they share several common features including small size, a coiled–coil secondary structure and short conserved motifs in specific positions. Although the precise function of LSU-like proteins is still unknown there is some evidence that members of the LSU family are involved in plant responses to environmental challenges, such as sulfur deficiency, and possibly in plant immune responses. Various bioinformatic approaches have identified LSU-like proteins as important hubs for integration of signals from environmental stimuli. In this paper we review a variety of published data on LSU gene expression, the properties of lsu mutants and features of LSU-like proteins in the hope of shedding some light on their possible role in plant metabolism. Frontiers Media S.A. 2015-01-13 /pmc/articles/PMC4292543/ /pubmed/25628631 http://dx.doi.org/10.3389/fpls.2014.00774 Text en Copyright © 2015 Sirko, Wawrzynska, Rodrıguez and Sektas. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Sirko, Agnieszka Wawrzyńska, Anna Rodríguez, Milagros Collados Sęktas, Pawel The family of LSU-like proteins |
title | The family of LSU-like proteins |
title_full | The family of LSU-like proteins |
title_fullStr | The family of LSU-like proteins |
title_full_unstemmed | The family of LSU-like proteins |
title_short | The family of LSU-like proteins |
title_sort | family of lsu-like proteins |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4292543/ https://www.ncbi.nlm.nih.gov/pubmed/25628631 http://dx.doi.org/10.3389/fpls.2014.00774 |
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