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An evaluation of direct PCR amplification
AIM: To generate complete DNA profiles from blood and saliva samples deposited on FTA® and non-FTA® paper substrates following a direct amplification protocol. METHODS: Saliva samples from living donors and blood samples from deceased individuals were deposited on ten different FTA® and non-FTA® sub...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Croatian Medical Schools
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4295066/ https://www.ncbi.nlm.nih.gov/pubmed/25559837 http://dx.doi.org/10.3325/cmj.2014.55.655 |
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author | Hall, Daniel E. Roy, Reena |
author_facet | Hall, Daniel E. Roy, Reena |
author_sort | Hall, Daniel E. |
collection | PubMed |
description | AIM: To generate complete DNA profiles from blood and saliva samples deposited on FTA® and non-FTA® paper substrates following a direct amplification protocol. METHODS: Saliva samples from living donors and blood samples from deceased individuals were deposited on ten different FTA® and non-FTA® substrates. These ten paper substrates containing body fluids were kept at room temperature for varying lengths of time ranging from one day to approximately one year. For all assays in this research, 1.2 mm punches were collected from each substrate containing one type of body fluid and amplified with reagents provided in the nine commercial polymerase chain reaction (PCR) amplification kits. The substrates were not subjected to purification reagent or extraction buffer prior to amplification. RESULTS: Success rates were calculated for all nine amplification kits and all ten substrates based on their ability to yield complete DNA profiles following a direct amplification protocol. Six out of the nine amplification kits, and four out of the ten paper substrates had the highest success rates overall. CONCLUSION: The data show that it is possible to generate complete DNA profiles following a direct amplification protocol using both standard (non-direct) and direct PCR amplification kits. The generation of complete DNA profiles appears to depend more on the success of the amplification kit rather than the than the FTA®- or non-FTA®-based substrates. |
format | Online Article Text |
id | pubmed-4295066 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Croatian Medical Schools |
record_format | MEDLINE/PubMed |
spelling | pubmed-42950662015-01-21 An evaluation of direct PCR amplification Hall, Daniel E. Roy, Reena Croat Med J Forensic Science AIM: To generate complete DNA profiles from blood and saliva samples deposited on FTA® and non-FTA® paper substrates following a direct amplification protocol. METHODS: Saliva samples from living donors and blood samples from deceased individuals were deposited on ten different FTA® and non-FTA® substrates. These ten paper substrates containing body fluids were kept at room temperature for varying lengths of time ranging from one day to approximately one year. For all assays in this research, 1.2 mm punches were collected from each substrate containing one type of body fluid and amplified with reagents provided in the nine commercial polymerase chain reaction (PCR) amplification kits. The substrates were not subjected to purification reagent or extraction buffer prior to amplification. RESULTS: Success rates were calculated for all nine amplification kits and all ten substrates based on their ability to yield complete DNA profiles following a direct amplification protocol. Six out of the nine amplification kits, and four out of the ten paper substrates had the highest success rates overall. CONCLUSION: The data show that it is possible to generate complete DNA profiles following a direct amplification protocol using both standard (non-direct) and direct PCR amplification kits. The generation of complete DNA profiles appears to depend more on the success of the amplification kit rather than the than the FTA®- or non-FTA®-based substrates. Croatian Medical Schools 2014-12 /pmc/articles/PMC4295066/ /pubmed/25559837 http://dx.doi.org/10.3325/cmj.2014.55.655 Text en Copyright © 2014 by the Croatian Medical Journal. All rights reserved. http://creativecommons.org/licenses/by/2.5/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Forensic Science Hall, Daniel E. Roy, Reena An evaluation of direct PCR amplification |
title | An evaluation of direct PCR amplification |
title_full | An evaluation of direct PCR amplification |
title_fullStr | An evaluation of direct PCR amplification |
title_full_unstemmed | An evaluation of direct PCR amplification |
title_short | An evaluation of direct PCR amplification |
title_sort | evaluation of direct pcr amplification |
topic | Forensic Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4295066/ https://www.ncbi.nlm.nih.gov/pubmed/25559837 http://dx.doi.org/10.3325/cmj.2014.55.655 |
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