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A general mechanism for competitor-induced dissociation of molecular complexes

The kinetic stability of non-covalent macromolecular complexes controls many biological phenomena. Here we find that physical models of complex dissociation predict that competitor molecules will in general accelerate the breakdown of isolated bimolecular complexes by occluding rapid rebinding of th...

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Detalles Bibliográficos
Autores principales: Paramanathan, Thayaparan, Reeves, Daniel, Friedman, Larry J., Kondev, Jane, Gelles, Jeff
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4301414/
https://www.ncbi.nlm.nih.gov/pubmed/25342513
http://dx.doi.org/10.1038/ncomms6207
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author Paramanathan, Thayaparan
Reeves, Daniel
Friedman, Larry J.
Kondev, Jane
Gelles, Jeff
author_facet Paramanathan, Thayaparan
Reeves, Daniel
Friedman, Larry J.
Kondev, Jane
Gelles, Jeff
author_sort Paramanathan, Thayaparan
collection PubMed
description The kinetic stability of non-covalent macromolecular complexes controls many biological phenomena. Here we find that physical models of complex dissociation predict that competitor molecules will in general accelerate the breakdown of isolated bimolecular complexes by occluding rapid rebinding of the two binding partners. This prediction is largely independent of molecular details. We confirm the prediction with single-molecule fluorescence experiments on a well-characterized DNA strand dissociation reaction. Contrary to common assumptions, competitor–induced acceleration of dissociation can occur in biologically relevant competitor concentration ranges and does not necessarily implyternary association of competitor with the bimolecular complex. Thus, occlusion of complex rebinding may play a significant role in a variety of biomolecular processes. The results also show that single-molecule colocalization experiments can accurately measure dissociation rates despite their limited spatio temporal resolution.
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spelling pubmed-43014142015-04-24 A general mechanism for competitor-induced dissociation of molecular complexes Paramanathan, Thayaparan Reeves, Daniel Friedman, Larry J. Kondev, Jane Gelles, Jeff Nat Commun Article The kinetic stability of non-covalent macromolecular complexes controls many biological phenomena. Here we find that physical models of complex dissociation predict that competitor molecules will in general accelerate the breakdown of isolated bimolecular complexes by occluding rapid rebinding of the two binding partners. This prediction is largely independent of molecular details. We confirm the prediction with single-molecule fluorescence experiments on a well-characterized DNA strand dissociation reaction. Contrary to common assumptions, competitor–induced acceleration of dissociation can occur in biologically relevant competitor concentration ranges and does not necessarily implyternary association of competitor with the bimolecular complex. Thus, occlusion of complex rebinding may play a significant role in a variety of biomolecular processes. The results also show that single-molecule colocalization experiments can accurately measure dissociation rates despite their limited spatio temporal resolution. 2014-10-24 /pmc/articles/PMC4301414/ /pubmed/25342513 http://dx.doi.org/10.1038/ncomms6207 Text en http://www.nature.com/authors/editorial_policies/license.html#terms Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Paramanathan, Thayaparan
Reeves, Daniel
Friedman, Larry J.
Kondev, Jane
Gelles, Jeff
A general mechanism for competitor-induced dissociation of molecular complexes
title A general mechanism for competitor-induced dissociation of molecular complexes
title_full A general mechanism for competitor-induced dissociation of molecular complexes
title_fullStr A general mechanism for competitor-induced dissociation of molecular complexes
title_full_unstemmed A general mechanism for competitor-induced dissociation of molecular complexes
title_short A general mechanism for competitor-induced dissociation of molecular complexes
title_sort general mechanism for competitor-induced dissociation of molecular complexes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4301414/
https://www.ncbi.nlm.nih.gov/pubmed/25342513
http://dx.doi.org/10.1038/ncomms6207
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