Cargando…
ExpaRNA-P: simultaneous exact pattern matching and folding of RNAs
BACKGROUND: Identifying sequence-structure motifs common to two RNAs can speed up the comparison of structural RNAs substantially. The core algorithm of the existent approach ExpaRNA solves this problem for a priori known input structures. However, such structures are rarely known; moreover, predict...
Autores principales: | Otto, Christina, Möhl, Mathias, Heyne, Steffen, Amit, Mika, Landau, Gad M, Backofen, Rolf, Will, Sebastian |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4302096/ https://www.ncbi.nlm.nih.gov/pubmed/25551362 http://dx.doi.org/10.1186/s12859-014-0404-0 |
Ejemplares similares
-
Freiburg RNA Tools: a web server integrating IntaRNA, ExpaRNA and LocARNA
por: Smith, Cameron, et al.
Publicado: (2010) -
Lightweight comparison of RNAs based on exact sequence–structure matches
por: Heyne, Steffen, et al.
Publicado: (2009) -
SPARSE: quadratic time simultaneous alignment and folding of RNAs without sequence-based heuristics
por: Will, Sebastian, et al.
Publicado: (2015) -
Fast and accurate structure probability estimation for simultaneous alignment and folding of RNAs with Markov chains
por: Miladi, Milad, et al.
Publicado: (2020) -
Overexpression of AcEXPA23 Promotes Lateral Root Development in Kiwifruit
por: Wu, Zhiyong, et al.
Publicado: (2022)