Cargando…

Nonparametric Bayesian clustering to detect bipolar methylated genomic loci

BACKGROUND: With recent development in sequencing technology, a large number of genome-wide DNA methylation studies have generated massive amounts of bisulfite sequencing data. The analysis of DNA methylation patterns helps researchers understand epigenetic regulatory mechanisms. Highly variable met...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wu, Xiaowei, Sun, Ming-an, Zhu, Hongxiao, Xie, Hehuang
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Methodology Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4302125/ https://www.ncbi.nlm.nih.gov/pubmed/25592753 http://dx.doi.org/10.1186/s12859-014-0439-2

Ejemplares similares

Mammalian Brain Development is Accompanied by a Dramatic Increase in Bipolar DNA Methylation
por: Sun, Ming-an, et al.
Publicado: (2016)

Nonparametric intensity bounds for the delineation of spatial clusters
por: Oliveira, Fernando LP, et al.
Publicado: (2011)

An investigation of gene-gene interactions in dose-response studies with Bayesian nonparametrics
por: Beam, Andrew L, et al.
Publicado: (2015)

A Bayesian nonparametric method for prediction in EST analysis
por: Lijoi, Antonio, et al.
Publicado: (2007)

Age-adjusted nonparametric detection of differential DNA methylation with case–control designs
por: Huang, Hanwen, et al.
Publicado: (2013)

Nonparametric analysis of nonhomogeneous multistate processes with clustered observations
por: Bakoyannis, Giorgos
Publicado: (2020)

A nonparametric Bayesian approach for clustering bisulfate-based DNA methylation profiles
por: Zhang, Lin, et al.
Publicado: (2012)

Bayesian nonparametrics /
por: Ghosh, J. K.
Publicado: (2003)

Bayesian nonparametrics
por: Hjort, Nils Lid, et al.
Publicado: (2010)

Bayesian nonparametrics
por: Ghosh, J K, et al.
Publicado: (2003)

Diffraction-Limited Molecular Cluster Quantification with Bayesian Nonparametrics
por: Bryan, J. Shepard, et al.
Publicado: (2022)

A nonparametric Bayesian method of translating machine learning scores to probabilities in clinical decision support
por: Connolly, Brian, et al.
Publicado: (2017)

Colorimetric detection of both total genomic and loci-specific DNA methylation from limited DNA inputs
por: Wee, Eugene J. H., et al.
Publicado: (2015)

A novel approach to the clustering of microarray data via nonparametric density estimation
por: De Bin, Riccardo, et al.
Publicado: (2011)

A nonparametric spatial scan statistic for continuous data
por: Jung, Inkyung, et al.
Publicado: (2015)

Nonparametric Tests for Differential Histone Enrichment with ChIP-Seq Data
por: Wu, Qian, et al.
Publicado: (2015)

Bayesian shrinkage mapping of quantitative trait loci in variance component models
por: Fang, Ming
Publicado: (2010)

Bayesian nonparametric data analysis
por: Müller, Peter, et al.
Publicado: (2015)

Nonparametric Bayesian inference in biostatistics
por: Mitra, Riten, et al.
Publicado: (2015)

Virtual methylome dissection facilitated by single-cell analyses
por: Yin, Liduo, et al.
Publicado: (2019)

A nonparametric model for quality control of database search results in shotgun proteomics
por: Zhang, Jiyang, et al.
Publicado: (2008)

A Bayesian Assignment Method for Ambiguous Bisulfite Short Reads
por: Tran, Hong, et al.
Publicado: (2016)

Detecting differentially methylated loci for multiple treatments based on high-throughput methylation data
por: Chen, Zhongxue, et al.
Publicado: (2014)

Practical nonparametric and semiparametric bayesian statistics
por: Dey, Dipak, et al.
Publicado: (1998)

Practical nonparametric and semiparametric Bayesian statistics /
Publicado: (1998)

Multitrait analysis of quantitative trait loci using Bayesian composite space approach
por: Fang, Ming, et al.
Publicado: (2008)

Bayesian inference of population size history from multiple loci
por: Heled, Joseph, et al.
Publicado: (2008)

Nonparametric methods for the analysis of single-color pathogen microarrays
por: Jabado, Omar J, et al.
Publicado: (2010)

Prior processes and their applications: nonparametric Bayesian estimation
por: Phadia, Eswar G
Publicado: (2016)

Prior processes and their applications: nonparametric Bayesian estimation
por: Eswar G , Phadia
Publicado: (2013)

Bayesian model averaging for nonparametric discontinuity design
por: Hinne, Max, et al.
Publicado: (2022)

Nonparametric Bayesian learning for collaborative robot multimodal introspection
por: Zhou, Xuefeng, et al.
Publicado: (2020)

A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
por: Lin, Min, et al.
Publicado: (2006)

Hybrid elementary flux analysis/nonparametric modeling: application for bioprocess control
por: Teixeira, Ana P, et al.
Publicado: (2007)

A semi-nonparametric mixture model for selecting functionally consistent proteins
por: Yu, Lianbo, et al.
Publicado: (2010)

Functional mapping of reaction norms to multiple environmental signals through nonparametric covariance estimation
por: Yap, John S, et al.
Publicado: (2011)

Nonparametric statistical tests: friend or foe?
por: Politi, María Teresa, et al.
Publicado: (2021)

A powerful nonparametric method for detecting differentially co-expressed genes: distance correlation screening and edge-count test
por: Zhang, Qingyang
Publicado: (2018)

Identifying Transcriptional Regulatory Modules Among Different Chromatin States in Mouse Neural Stem Cells
por: Banerjee, Sharmi, et al.
Publicado: (2019)

Bayesian nonparametric discovery of isoforms and individual specific quantification
por: Aguiar, Derek, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_e1k7p4lb2hmmg4f3c35hifq2fd